G1308608



Basic Information


Item Value
gene id G1308608
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 55072592 ~ 55072811 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1492907
CGTTTTAGTAGGGTCTGCTCTGTTCTACATTTTGGtagttgagacataaaaagggCATTGTTAGAAAGGTCATCTATTACAGTCAAATAATGTCTGAGCGTTTCGGTGTCAATATGAccgattctgttggaccaaacctcaaatgcaaatgGCGAGTTTAAACTGCATGTCGTGAGAGAGGAATTAGTTATCTTTCACATTTGTTGCGAGTGGCATGGGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1492907 True 220 lncRNA 0.41 1 55072592 55072811

Neighbor


gene id symbol gene type direction distance location
LOC110490752 LOC106609295 coding downstream 18722 55040001 ~ 55053870 (-)
LOC110490333 LOC106576174 coding downstream 55561 54969443 ~ 55017031 (-)
LOC110490751 LOC106609299 coding downstream 108444 54879640 ~ 54964148 (-)
LOC110490331 LOC106576204 coding downstream 472714 54597626 ~ 54599878 (-)
LOC110490332 LOC106609300 coding downstream 653496 54411303 ~ 54419096 (-)
LOC110490754 NA coding upstream 65108 55136560 ~ 55147893 (-)
LOC110490337 LOC106609287 coding upstream 75949 55148760 ~ 55155353 (-)
LOC110490338 LOC106576183 coding upstream 98106 55170917 ~ 55217377 (-)
LOC110490755 mcm10 coding upstream 156093 55228904 ~ 55235465 (-)
LOC110490341 optn coding upstream 163843 55236654 ~ 55251104 (-)
G1308593 NA non-coding downstream 22271 55050107 ~ 55050321 (-)
G1308592 NA non-coding downstream 26606 55045762 ~ 55045986 (-)
G1308578 NA non-coding downstream 37128 55027742 ~ 55035464 (-)
G1308517 NA non-coding downstream 196376 54875988 ~ 54876216 (-)
G1308516 NA non-coding downstream 196995 54875396 ~ 54875597 (-)
G1308637 NA non-coding upstream 83110 55155921 ~ 55156228 (-)
G1308681 NA non-coding upstream 162700 55235511 ~ 55235761 (-)
G1308682 NA non-coding upstream 163128 55235939 ~ 55236208 (-)
G1308683 NA non-coding upstream 167802 55240613 ~ 55242374 (-)
G1307901 NA other downstream 304170 54766972 ~ 54768422 (-)
G1307473 NA other downstream 922052 54150044 ~ 54150540 (-)
G1307309 NA other downstream 1150464 53899310 ~ 53922128 (-)
efcab6 efcab6 other downstream 1315244 53756479 ~ 53786697 (-)
G1306232 LOC106576137 other downstream 2010312 53054849 ~ 53062280 (-)
LOC110490757 LOC106576193 other upstream 345512 55417169 ~ 55438953 (-)
G1308831 NA other upstream 483421 55556232 ~ 55556574 (-)
G1308906 NA other upstream 673474 55746285 ~ 55747753 (-)
G1309187 NA other upstream 981680 56054491 ~ 56055064 (-)

Expression



Co-expression Network