G1308155


Basic Information

Item Value
gene id G1308155
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 55123401 ~ 55123859 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1492331
gcatagaacaagcaagacatagcaacataggacaagcaagacgcagcatacagacagagcaacataggacaagcaagacgtagcatacagacagagcaacataaaacaaaaagcagcaagacaaaattcataaaagcaacaaagtgtttccacacctcacaagctacagacaacagacaacatggaaagcggcaacacacagctagggaccatgttcacaaatctgattgacctttagccatttcttcaagcattttgtgaaagtgtgatatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1492331 True 274 lncRNA 0.41 2 55123401 55123859

Neighbor

gene id symbol gene type direction distance location
LOC100272211 socs2 coding upstream 59659 55056852 ~ 55063742 (+)
LOC110490334 LOC106609296 coding upstream 83592 55027671 ~ 55039809 (+)
LOC118938895 NA coding upstream 92484 55023526 ~ 55030917 (+)
LOC118938814 NA coding upstream 105010 55016905 ~ 55018391 (+)
LOC110490330 LOC106576173 coding upstream 723973 54383635 ~ 54399850 (+)
LOC110490339 LOC106576184 coding downstream 33847 55157706 ~ 55170847 (+)
LOC110490340 pahx coding downstream 94733 55218592 ~ 55224435 (+)
LOC110490342 NA coding downstream 116137 55239996 ~ 55243832 (+)
LOC110490343 LOC106576187 coding downstream 127918 55251777 ~ 55260699 (+)
LOC110490345 nudt5 coding downstream 218945 55342804 ~ 55346856 (+)
G1308108 NA non-coding upstream 71533 55051623 ~ 55051868 (+)
G1308107 NA non-coding upstream 74518 55048488 ~ 55048883 (+)
G1308102 NA non-coding upstream 79211 55042052 ~ 55044190 (+)
G1308059 NA non-coding upstream 134325 54969458 ~ 54989076 (+)
G1308220 NA non-coding downstream 101025 55224884 ~ 55225220 (+)
G1308227 NA non-coding downstream 117155 55241014 ~ 55242480 (+)
G1308238 NA non-coding downstream 139099 55262958 ~ 55278451 (+)
G1308246 NA non-coding downstream 154769 55278628 ~ 55278966 (+)
LOC110490314 LOC106576157 other upstream 1233010 53875911 ~ 53890829 (+)
G1306708 NA other upstream 1540049 53580541 ~ 53583352 (+)
sox5 LOC106576150 other upstream 1747989 53352462 ~ 53471763 (+)
G1305302 NA other upstream 2610351 52512629 ~ 52513050 (+)
G1304886 NA other upstream 3208391 51914597 ~ 51915010 (+)
G1308299 LOC106576208 other downstream 224177 55348036 ~ 55349205 (+)
LOC110490357 LOC106609270 other downstream 446159 55569924 ~ 55583925 (+)
G1309147 NA other downstream 892589 56016448 ~ 56016948 (+)

Expression


Co-expression Network