G1308683


Basic Information

Item Value
gene id G1308683
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 55240613 ~ 55242374 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1492996
ttagtacagtggtgaacctataggtcttcagtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgacaggttagtacagtggtgaacctatagatcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgacaggttagtacagtggtgaacctatagatcttcagtgtgtgacaggttagtacagtggtgaacctatagatcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacagtggtgaacctataggtcttcagtgtgtgacagtggtgaacctatagatcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtatgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttagtacagtggtgaacctataggtcttcagtgtgtgacaggttggtgattctgaaaggacagcaaCTGTAATACCATCACACTCATGTAGGAGAGTGGACTTTTTATAAAACacaaagggccagtggtgtagtgcaGGGTATAGGCAGGTATCTAGCTTCTGATGGCATAGGAATGGATGACTTGGCTAGCTAGATTTATCTCCCCAGAGACCAGCAAAGAAAAATCCAGATTGGATCTTTTCTCTTTAGTATTAAACCTTTCCTTTCCAACAAAAATTTAAGAGATTTAAATTAGaaaaattgaaaataataattatcatgttattataatcattattttatAAATCATTAGCCCTTGTCTAAAGGCTTAGAAGGCCATTGTTCTCCAATGTGTTTGGGTCAGTAATATTTGTAGAGCGGCTCTATTTTCTCTCAGCatgcattttttaaaacttttctaTATGTCTAAAGAATCTATatgttctgaaatatgaacacggatatactggacattttgaactctTGTGGTGGTGATTTGACACAATTACAACcatggtcttgaattggactcgCATTTTTCCGGTCTTGACTGTCTCGC

Function

NR:

description
PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1492996 True 1320 lncRNA 0.41 2 55240613 55242374

Neighbor

gene id symbol gene type direction distance location
LOC110490755 mcm10 coding downstream 5148 55228904 ~ 55235465 (-)
LOC110490338 LOC106576183 coding downstream 23236 55170917 ~ 55217377 (-)
LOC110490337 LOC106609287 coding downstream 85260 55148760 ~ 55155353 (-)
LOC110490754 NA coding downstream 92720 55136560 ~ 55147893 (-)
LOC110490752 LOC106609295 coding downstream 186743 55040001 ~ 55053870 (-)
LOC110490344 LOC106576188 coding upstream 20570 55262938 ~ 55330752 (-)
LOC110490346 LOC106576189 coding upstream 89898 55332272 ~ 55342699 (-)
LOC110490348 LOC100136332 coding upstream 114740 55355672 ~ 55374104 (-)
LOC118938816 NA coding upstream 128636 55371010 ~ 55372484 (-)
LOC110490757 LOC106576193 coding upstream 174795 55417169 ~ 55438953 (-)
G1308682 NA non-coding downstream 4405 55235939 ~ 55236208 (-)
G1308681 NA non-coding downstream 4852 55235511 ~ 55235761 (-)
G1308637 NA non-coding downstream 84385 55155921 ~ 55156228 (-)
G1308608 NA non-coding downstream 167802 55072592 ~ 55072811 (-)
G1308694 NA non-coding upstream 41998 55284372 ~ 55284684 (-)
G1308696 NA non-coding upstream 43585 55285959 ~ 55286271 (-)
G1308699 NA non-coding upstream 50874 55293248 ~ 55293447 (-)
G1308704 NA non-coding upstream 55658 55298032 ~ 55298263 (-)
G1307901 NA other downstream 472191 54766972 ~ 54768422 (-)
G1307473 NA other downstream 1090073 54150044 ~ 54150540 (-)
G1307309 NA other downstream 1318485 53899310 ~ 53922128 (-)
efcab6 efcab6 other downstream 1483265 53756479 ~ 53786697 (-)
G1308831 NA other upstream 313858 55556232 ~ 55556574 (-)
G1308906 NA other upstream 503911 55746285 ~ 55747753 (-)
G1309187 NA other upstream 812117 56054491 ~ 56055064 (-)
G1310261 LOC106609352 other upstream 1729367 56971741 ~ 56973518 (-)

Expression


Co-expression Network