G1308253


Basic Information

Item Value
gene id G1308253
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 55288900 ~ 55289104 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1492444
AATATTGTCAGGGTCAGTGGTGTCTCTCCTGTCCCTAGGGAACAAGCATGGTATACTGCAGTAATAACACCAACACATACTGTAGCCGCCTACTTCTGgacagtgagtgactgagtgagtgagtgaaaccTTGTGGAACTACTGAGCATTGGGCCAGATCCAAGGTGatatctgaacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1492444 True 205 lncRNA 0.48 1 55288900 55289104

Neighbor

gene id symbol gene type direction distance location
LOC110490343 LOC106576187 coding upstream 28201 55251777 ~ 55260699 (+)
LOC110490342 NA coding upstream 45068 55239996 ~ 55243832 (+)
LOC110490340 pahx coding upstream 64465 55218592 ~ 55224435 (+)
LOC110490339 LOC106576184 coding upstream 118053 55157706 ~ 55170847 (+)
LOC110490753 LOC106609289 coding upstream 151723 55112600 ~ 55137177 (+)
LOC110490345 nudt5 coding downstream 53700 55342804 ~ 55346856 (+)
LOC118938815 NA coding downstream 63650 55352754 ~ 55356008 (+)
LOC110511067 rbm17 coding downstream 87316 55376420 ~ 55382696 (+)
LOC110490350 LOC106576192 coding downstream 95351 55384455 ~ 55394138 (+)
LOC110490357 LOC106609270 coding downstream 280820 55569924 ~ 55583925 (+)
G1308252 NA non-coding upstream 152 55288518 ~ 55288748 (+)
G1308249 NA non-coding upstream 3928 55284534 ~ 55284972 (+)
G1308248 NA non-coding upstream 6250 55282235 ~ 55282650 (+)
G1308247 NA non-coding upstream 8843 55279697 ~ 55280057 (+)
G1308246 NA non-coding upstream 9934 55278628 ~ 55278966 (+)
G1308255 NA non-coding downstream 1907 55291011 ~ 55291261 (+)
G1308256 NA non-coding downstream 5145 55294249 ~ 55294463 (+)
G1308258 NA non-coding downstream 6188 55295292 ~ 55295496 (+)
G1308263 NA non-coding downstream 11591 55300695 ~ 55300942 (+)
G1308273 NA non-coding downstream 18265 55307369 ~ 55307603 (+)
G1308238 NA other upstream 22624 55262958 ~ 55278451 (+)
LOC110490314 LOC106576157 other upstream 1398509 53875911 ~ 53890829 (+)
G1306708 NA other upstream 1705548 53580541 ~ 53583352 (+)
sox5 LOC106576150 other upstream 1913488 53352462 ~ 53471763 (+)
G1308299 LOC106576208 other downstream 58932 55348036 ~ 55349205 (+)
G1309147 NA other downstream 727344 56016448 ~ 56016948 (+)
G1309163 LOC100136012 other downstream 747798 56036902 ~ 56037403 (+)
G1309787 NA other downstream 1623227 56912331 ~ 56914223 (+)

Expression


Co-expression Network