G1308281


Basic Information

Item Value
gene id G1308281
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 55316317 ~ 55316612 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1492472
aattcggtatcattgaacgcgaagaccgacaaccgccgaaacatctattctataacgacatgaaagaatgtcactctgaactatccattctaaccacgacagagaggggggacagactcaccaacagaaacaaactttaaCAGACATCCCGAGCGTAATTTTtttatattgattgcaattattcccgaatgagtgagcgttcatgtgcaaaggattagaatttcaattgttataattatcaactttgtagtGTCTCATCTCAGTTGACCCCTACTTCCCTTTGTGTCCACCAAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1492472 True 296 lncRNA 0.41 1 55316317 55316612

Neighbor

gene id symbol gene type direction distance location
LOC110490343 LOC106576187 coding upstream 55618 55251777 ~ 55260699 (+)
LOC110490342 NA coding upstream 72485 55239996 ~ 55243832 (+)
LOC110490340 pahx coding upstream 91882 55218592 ~ 55224435 (+)
LOC110490339 LOC106576184 coding upstream 145470 55157706 ~ 55170847 (+)
LOC110490753 LOC106609289 coding upstream 179140 55112600 ~ 55137177 (+)
LOC110490345 nudt5 coding downstream 26192 55342804 ~ 55346856 (+)
LOC118938815 NA coding downstream 36142 55352754 ~ 55356008 (+)
LOC110511067 rbm17 coding downstream 59808 55376420 ~ 55382696 (+)
LOC110490350 LOC106576192 coding downstream 67843 55384455 ~ 55394138 (+)
LOC110490357 LOC106609270 coding downstream 253312 55569924 ~ 55583925 (+)
G1308277 NA non-coding upstream 3681 55312421 ~ 55312636 (+)
G1308274 NA non-coding upstream 7083 55309020 ~ 55309234 (+)
G1308273 NA non-coding upstream 8714 55307369 ~ 55307603 (+)
G1308263 NA non-coding upstream 15375 55300695 ~ 55300942 (+)
G1308258 NA non-coding upstream 20821 55295292 ~ 55295496 (+)
G1308291 NA non-coding downstream 13526 55330138 ~ 55330711 (+)
G1308292 NA non-coding downstream 14806 55331418 ~ 55331634 (+)
G1308231 NA non-coding downstream 30845 55347457 ~ 55347827 (+)
G1308305 NA non-coding downstream 45156 55361768 ~ 55362148 (+)
G1308238 NA other upstream 50041 55262958 ~ 55278451 (+)
LOC110490314 LOC106576157 other upstream 1425926 53875911 ~ 53890829 (+)
G1306708 NA other upstream 1732965 53580541 ~ 53583352 (+)
sox5 LOC106576150 other upstream 1940905 53352462 ~ 53471763 (+)
G1308299 LOC106576208 other downstream 31424 55348036 ~ 55349205 (+)
G1309147 NA other downstream 699836 56016448 ~ 56016948 (+)
G1309163 LOC100136012 other downstream 720290 56036902 ~ 56037403 (+)
G1309787 NA other downstream 1595719 56912331 ~ 56914223 (+)

Expression


Co-expression Network