G1308291


Basic Information

Item Value
gene id G1308291
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 55330138 ~ 55330711 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1492482
GGATCTCTTTCAATTCAAATATTTTCTTGATATCGTCGACTTGCTTTTTCCACGTCCCTTTCCCGGACTCTCCATTCTCCCGATCCATGGTGGAACAGGGGAAAACCGGGGCAAACGATGCCAGTGAGTCTCAGCAGCCCCCCGCGATAACGCAGCTTTCCCACGCTTCGAGTTACACGTCCTGCTCGTGGGGAGTAGACCCACGCGCATAGAACGAGCTAGGCAGAAAACCTTTTCAAGCTCGTGGCTTTCCCGCTGTAGAAATATCTCCGCAGCTCTCTAAAACAGGTCTCCTGTTTTCTTCGCTTCTTTTTCTGTCTACAGCGTTCCGTTTGACCGACAATGAGCTTTCACCGTTTGCGGTTGCACCTGCAGGGTTCAACTGGTCTAGATTATCTTGACATAAATGGTTTGGGTCTACGTGTCACCGTTGCGCGAtcgccttgtctctctctccaaaaaATGTTCCCGTTTTAATGAAGTCCTCTGTTGAGCCGTGTGGTGCGTAATGCAAGGACCGAGGAGTATTATTTCATCTAACCATGCTGATTGTGCCATCGGTTGTTATGGCAAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1492482 True 574 lncRNA 0.49 1 55330138 55330711

Neighbor

gene id symbol gene type direction distance location
LOC110490343 LOC106576187 coding upstream 69439 55251777 ~ 55260699 (+)
LOC110490342 NA coding upstream 86306 55239996 ~ 55243832 (+)
LOC110490340 pahx coding upstream 105703 55218592 ~ 55224435 (+)
LOC110490339 LOC106576184 coding upstream 159291 55157706 ~ 55170847 (+)
LOC110490753 LOC106609289 coding upstream 192961 55112600 ~ 55137177 (+)
LOC110490345 nudt5 coding downstream 12093 55342804 ~ 55346856 (+)
LOC118938815 NA coding downstream 22043 55352754 ~ 55356008 (+)
LOC110511067 rbm17 coding downstream 45709 55376420 ~ 55382696 (+)
LOC110490350 LOC106576192 coding downstream 53744 55384455 ~ 55394138 (+)
LOC110490357 LOC106609270 coding downstream 239213 55569924 ~ 55583925 (+)
G1308281 NA non-coding upstream 13526 55316317 ~ 55316612 (+)
G1308277 NA non-coding upstream 17502 55312421 ~ 55312636 (+)
G1308274 NA non-coding upstream 20904 55309020 ~ 55309234 (+)
G1308273 NA non-coding upstream 22535 55307369 ~ 55307603 (+)
G1308263 NA non-coding upstream 29196 55300695 ~ 55300942 (+)
G1308292 NA non-coding downstream 707 55331418 ~ 55331634 (+)
G1308231 NA non-coding downstream 16746 55347457 ~ 55347827 (+)
G1308305 NA non-coding downstream 31057 55361768 ~ 55362148 (+)
G1308306 NA non-coding downstream 32858 55363569 ~ 55364473 (+)
G1308238 NA other upstream 63862 55262958 ~ 55278451 (+)
LOC110490314 LOC106576157 other upstream 1439747 53875911 ~ 53890829 (+)
G1306708 NA other upstream 1746786 53580541 ~ 53583352 (+)
sox5 LOC106576150 other upstream 1954726 53352462 ~ 53471763 (+)
G1308299 LOC106576208 other downstream 17325 55348036 ~ 55349205 (+)
G1309147 NA other downstream 685737 56016448 ~ 56016948 (+)
G1309163 LOC100136012 other downstream 706191 56036902 ~ 56037403 (+)
G1309787 NA other downstream 1581620 56912331 ~ 56914223 (+)

Expression


Co-expression Network