G1308316


Basic Information

Item Value
gene id G1308316
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 55375776 ~ 55375995 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1492511
tcgatctagcaaagttttggttactggcccaacactaaccactagactacctgccaccctcgGTGAATGTGAAAGGTTAAGTGCTGTAATTGTGGGGGAGAACACAGTGCagcatttggtggatgccaggtgcAGAGAGTGTCTCAGAGATATAGGATCAGTTATGATATGCAGAGGCCTTAAAACAGATTGGTAGAACTACAGTGCGGACTGATGGAGC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106532290, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1492511 True 220 lncRNA 0.47 1 55375776 55375995

Neighbor

gene id symbol gene type direction distance location
LOC118938815 NA coding upstream 19768 55352754 ~ 55356008 (+)
LOC110490345 nudt5 coding upstream 28920 55342804 ~ 55346856 (+)
LOC110490343 LOC106576187 coding upstream 115077 55251777 ~ 55260699 (+)
LOC110490342 NA coding upstream 131944 55239996 ~ 55243832 (+)
LOC110490340 pahx coding upstream 151341 55218592 ~ 55224435 (+)
LOC110511067 rbm17 coding downstream 425 55376420 ~ 55382696 (+)
LOC110490350 LOC106576192 coding downstream 8460 55384455 ~ 55394138 (+)
LOC110490357 LOC106609270 coding downstream 193929 55569924 ~ 55583925 (+)
LOC110490758 LOC106576198 coding downstream 229022 55605017 ~ 55617741 (+)
LOC110490356 LOC106576202 coding downstream 247674 55623669 ~ 55629283 (+)
G1308313 LOC106576191 non-coding upstream 1936 55373084 ~ 55373840 (+)
G1308308 NA non-coding upstream 6486 55368987 ~ 55369290 (+)
G1308306 NA non-coding upstream 11303 55363569 ~ 55364473 (+)
G1308305 NA non-coding upstream 13628 55361768 ~ 55362148 (+)
G1308343 NA non-coding downstream 58736 55434731 ~ 55437606 (+)
G1308344 NA non-coding downstream 60200 55436195 ~ 55437102 (+)
G1308362 NA non-coding downstream 82399 55458394 ~ 55458950 (+)
G1308361 NA non-coding downstream 84680 55460675 ~ 55461371 (+)
G1308359 LOC106576194 non-coding downstream 85938 55461933 ~ 55462194 (+)
G1308299 LOC106576208 other upstream 26571 55348036 ~ 55349205 (+)
G1308238 NA other upstream 109500 55262958 ~ 55278451 (+)
LOC110490339 LOC106576184 other upstream 208613 55157706 ~ 55170847 (+)
LOC110490314 LOC106576157 other upstream 1485385 53875911 ~ 53890829 (+)
G1306708 NA other upstream 1792424 53580541 ~ 53583352 (+)
G1309147 NA other downstream 640453 56016448 ~ 56016948 (+)
G1309163 LOC100136012 other downstream 660907 56036902 ~ 56037403 (+)
G1309787 NA other downstream 1536336 56912331 ~ 56914223 (+)
G1310321 gdib other downstream 1663804 57039799 ~ 57050944 (+)

Expression


Co-expression Network