Gene
RNA
| Item | Value |
|---|---|
| gene id | G1308829 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 55537354 ~ 55540366 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106576195 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1493161 | True | 221 | lncRNA | 0.42 | 2 | 55537354 | 55540366 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490757 | LOC106576193 | coding | downstream | 98401 | 55417169 ~ 55438953 (-) |
| LOC110490348 | LOC100136332 | coding | downstream | 163250 | 55355672 ~ 55374104 (-) |
| LOC118938816 | NA | coding | downstream | 164870 | 55371010 ~ 55372484 (-) |
| LOC110490346 | LOC106576189 | coding | downstream | 194655 | 55332272 ~ 55342699 (-) |
| LOC110490344 | LOC106576188 | coding | downstream | 206602 | 55262938 ~ 55330752 (-) |
| LOC110490354 | LOC106576197 | coding | upstream | 44280 | 55584646 ~ 55604469 (-) |
| LOC110490355 | LOC106576199 | coding | upstream | 77315 | 55617681 ~ 55623649 (-) |
| LOC110490369 | LOC106576218 | coding | upstream | 1114384 | 56654750 ~ 56658049 (-) |
| LOC110490368 | LOC106576221 | coding | upstream | 1170701 | 56711067 ~ 56776535 (-) |
| LOC110490364 | LOC106576219 | coding | upstream | 1185945 | 56726311 ~ 56730594 (-) |
| G1308817 | LOC106576195 | non-coding | downstream | 5552 | 55510209 ~ 55531802 (-) |
| G1308814 | NA | non-coding | downstream | 43687 | 55493451 ~ 55493667 (-) |
| G1308810 | NA | non-coding | downstream | 52228 | 55484862 ~ 55485126 (-) |
| G1308809 | NA | non-coding | downstream | 52607 | 55484343 ~ 55484747 (-) |
| G1308808 | NA | non-coding | downstream | 54596 | 55482538 ~ 55482758 (-) |
| G1308845 | NA | non-coding | upstream | 90762 | 55631128 ~ 55631900 (-) |
| G1308850 | NA | non-coding | upstream | 97861 | 55638227 ~ 55638435 (-) |
| G1308859 | NA | non-coding | upstream | 118048 | 55658414 ~ 55658626 (-) |
| G1308863 | NA | non-coding | upstream | 123983 | 55664349 ~ 55664849 (-) |
| G1308872 | NA | non-coding | upstream | 144615 | 55684981 ~ 55685191 (-) |
| LOC110490337 | LOC106609287 | other | downstream | 385243 | 55148760 ~ 55155353 (-) |
| G1307901 | NA | other | downstream | 768932 | 54766972 ~ 54768422 (-) |
| G1307473 | NA | other | downstream | 1386814 | 54150044 ~ 54150540 (-) |
| G1307309 | NA | other | downstream | 1615226 | 53899310 ~ 53922128 (-) |
| G1308831 | NA | other | upstream | 15866 | 55556232 ~ 55556574 (-) |
| G1308906 | NA | other | upstream | 205919 | 55746285 ~ 55747753 (-) |
| G1309187 | NA | other | upstream | 514125 | 56054491 ~ 56055064 (-) |
| G1310261 | LOC106609352 | other | upstream | 1431375 | 56971741 ~ 56973518 (-) |
| LOC110490385 | LOC106576235 | other | upstream | 1585448 | 57125783 ~ 57143499 (-) |
