Gene
RNA
| Item | Value |
|---|---|
| gene id | G1308872 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 55684981 ~ 55685191 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1493208 | True | 211 | lncRNA | 0.55 | 1 | 55684981 | 55685191 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490355 | LOC106576199 | coding | downstream | 61332 | 55617681 ~ 55623649 (-) |
| LOC110490354 | LOC106576197 | coding | downstream | 80512 | 55584646 ~ 55604469 (-) |
| LOC110490351 | LOC106576194 | coding | downstream | 118871 | 55460350 ~ 55566110 (-) |
| LOC110490757 | LOC106576193 | coding | downstream | 246028 | 55417169 ~ 55438953 (-) |
| LOC118938816 | NA | coding | downstream | 312497 | 55371010 ~ 55372484 (-) |
| LOC110490369 | LOC106576218 | coding | upstream | 969559 | 56654750 ~ 56658049 (-) |
| LOC110490368 | LOC106576221 | coding | upstream | 1025876 | 56711067 ~ 56776535 (-) |
| LOC110490364 | LOC106576219 | coding | upstream | 1041120 | 56726311 ~ 56730594 (-) |
| LOC110490367 | LOC106609343 | coding | upstream | 1047115 | 56732306 ~ 56734711 (-) |
| LOC118938817 | NA | coding | upstream | 1094465 | 56779656 ~ 56782516 (-) |
| G1308863 | NA | non-coding | downstream | 20132 | 55664349 ~ 55664849 (-) |
| G1308859 | NA | non-coding | downstream | 26355 | 55658414 ~ 55658626 (-) |
| G1308850 | NA | non-coding | downstream | 46546 | 55638227 ~ 55638435 (-) |
| G1308845 | NA | non-coding | downstream | 53081 | 55631128 ~ 55631900 (-) |
| G1308829 | NA | non-coding | downstream | 144615 | 55537354 ~ 55540366 (-) |
| G1308873 | NA | non-coding | upstream | 1259 | 55686450 ~ 55686673 (-) |
| G1308890 | NA | non-coding | upstream | 28645 | 55713836 ~ 55714208 (-) |
| G1308891 | NA | non-coding | upstream | 29178 | 55714369 ~ 55714606 (-) |
| G1308923 | NA | non-coding | upstream | 90623 | 55775814 ~ 55776066 (-) |
| G1308924 | NA | non-coding | upstream | 91497 | 55776688 ~ 55776914 (-) |
| G1308831 | NA | other | downstream | 128407 | 55556232 ~ 55556574 (-) |
| LOC110490337 | LOC106609287 | other | downstream | 532870 | 55148760 ~ 55155353 (-) |
| G1307901 | NA | other | downstream | 916559 | 54766972 ~ 54768422 (-) |
| G1307473 | NA | other | downstream | 1534441 | 54150044 ~ 54150540 (-) |
| G1308906 | NA | other | upstream | 61094 | 55746285 ~ 55747753 (-) |
| G1309187 | NA | other | upstream | 369300 | 56054491 ~ 56055064 (-) |
| G1310261 | LOC106609352 | other | upstream | 1286550 | 56971741 ~ 56973518 (-) |
| LOC110490385 | LOC106576235 | other | upstream | 1440623 | 57125783 ~ 57143499 (-) |
| LOC110490387 | LOC106609365 | other | upstream | 1557489 | 57231181 ~ 57247843 (-) |
