Gene
RNA
| Item | Value |
|---|---|
| gene id | G1309127 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 55995756 ~ 55997564 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1493484 | False | 364 | lncRNA | 0.51 | 2 | 55995756 | 55997564 |
| TU1493486 | True | 331 | lncRNA | 0.50 | 2 | 55995756 | 55996606 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490355 | LOC106576199 | coding | downstream | 372107 | 55617681 ~ 55623649 (-) |
| LOC110490354 | LOC106576197 | coding | downstream | 391287 | 55584646 ~ 55604469 (-) |
| LOC110490351 | LOC106576194 | coding | downstream | 429646 | 55460350 ~ 55566110 (-) |
| LOC110490757 | LOC106576193 | coding | downstream | 556803 | 55417169 ~ 55438953 (-) |
| LOC118938816 | NA | coding | downstream | 623272 | 55371010 ~ 55372484 (-) |
| LOC110490369 | LOC106576218 | coding | upstream | 657186 | 56654750 ~ 56658049 (-) |
| LOC110490368 | LOC106576221 | coding | upstream | 713503 | 56711067 ~ 56776535 (-) |
| LOC110490364 | LOC106576219 | coding | upstream | 728747 | 56726311 ~ 56730594 (-) |
| LOC110490367 | LOC106609343 | coding | upstream | 734742 | 56732306 ~ 56734711 (-) |
| LOC118938817 | NA | coding | upstream | 782092 | 56779656 ~ 56782516 (-) |
| G1309102 | NA | non-coding | downstream | 38575 | 55952189 ~ 55957181 (-) |
| G1308992 | NA | non-coding | downstream | 135039 | 55860385 ~ 55860717 (-) |
| G1308989 | NA | non-coding | downstream | 139351 | 55856113 ~ 55856405 (-) |
| G1308959 | NA | non-coding | downstream | 198427 | 55794455 ~ 55797329 (-) |
| G1308934 | NA | non-coding | downstream | 205162 | 55790367 ~ 55790594 (-) |
| G1309138 | NA | non-coding | upstream | 8660 | 56006224 ~ 56006423 (-) |
| G1309141 | NA | non-coding | upstream | 10606 | 56008170 ~ 56009294 (-) |
| G1309143 | NA | non-coding | upstream | 13020 | 56010584 ~ 56010861 (-) |
| G1309146 | NA | non-coding | upstream | 18229 | 56015793 ~ 56016083 (-) |
| G1309186 | NA | non-coding | upstream | 55067 | 56052631 ~ 56052848 (-) |
| G1308906 | NA | other | downstream | 248003 | 55746285 ~ 55747753 (-) |
| G1308831 | NA | other | downstream | 439182 | 55556232 ~ 55556574 (-) |
| LOC110490337 | LOC106609287 | other | downstream | 843645 | 55148760 ~ 55155353 (-) |
| G1307901 | NA | other | downstream | 1227334 | 54766972 ~ 54768422 (-) |
| G1309187 | NA | other | upstream | 56927 | 56054491 ~ 56055064 (-) |
| G1310261 | LOC106609352 | other | upstream | 974177 | 56971741 ~ 56973518 (-) |
| LOC110490385 | LOC106576235 | other | upstream | 1128250 | 57125783 ~ 57143499 (-) |
| LOC110490387 | LOC106609365 | other | upstream | 1245116 | 57231181 ~ 57247843 (-) |
| G1310744 | NA | other | upstream | 1381275 | 57295439 ~ 57441427 (-) |
