G1310054


Basic Information

Item Value
gene id G1310054
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 56620934 ~ 56628935 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1494522
AAGCCTCAGCACAGCATCCTGCTCTGTACCAGACGCTGCCTCTCTTCACGCTCTCTGTTGGATCCTCCAGTCTACTGAGAGATTTAGTCCGCATTAGTGACAGCCCGGGCTAGACAAACAACCCATCCCAGAACCACCGACTCTGCCACGGCAACTACGTCGCACGACAACAGTCCCCGTACCaatgagaggaaccagagagacagacaagctTGTATTGATACACTCTTCTGAGCAGCAGACGGGAGATCAGAGTGGTTGAGTTTGAGGGCCTCGGTCACAATGCAGCCGTTTGTTTACTTTACAAAGAgattagagaaggagagagggaacaagagagaatgagagtgagaaggagagagggaacaagagagaaggagagggagaacgaggGACACTGACTTCAGCATCAAGTCACCGATATCCCACTCACAACATtccacacccaaacacacaacaACAGCCCCTATTCAATACatcagagaagagagggagggagagagggagcaaataagagagagggagggaaagagggacagtGGGTGGGACAAGGCGAGGGAGATCAGAAATCAAGGGAGAGCCAAGCGTTCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1494522 True 593 lncRNA 0.51 2 56620934 56628935

Neighbor

gene id symbol gene type direction distance location
LOC110490355 LOC106576199 coding downstream 997285 55617681 ~ 55623649 (-)
LOC110490354 LOC106576197 coding downstream 1016465 55584646 ~ 55604469 (-)
LOC110490351 LOC106576194 coding downstream 1054824 55460350 ~ 55566110 (-)
LOC110490757 LOC106576193 coding downstream 1181981 55417169 ~ 55438953 (-)
LOC118938816 NA coding downstream 1248450 55371010 ~ 55372484 (-)
LOC110490369 LOC106576218 coding upstream 25815 56654750 ~ 56658049 (-)
LOC110490368 LOC106576221 coding upstream 82132 56711067 ~ 56776535 (-)
LOC110490364 LOC106576219 coding upstream 97376 56726311 ~ 56730594 (-)
LOC110490367 LOC106609343 coding upstream 103371 56732306 ~ 56734711 (-)
LOC118938817 NA coding upstream 150721 56779656 ~ 56782516 (-)
G1310046 NA non-coding downstream 21483 56597418 ~ 56599451 (-)
G1310024 NA non-coding downstream 55552 56565100 ~ 56565382 (-)
G1310020 NA non-coding downstream 61027 56559693 ~ 56559907 (-)
G1310012 NA non-coding downstream 72451 56548275 ~ 56548483 (-)
G1309960 NA non-coding downstream 74629 56543027 ~ 56546305 (-)
G1310105 NA non-coding upstream 75763 56704698 ~ 56704911 (-)
G1310108 NA non-coding upstream 77849 56706784 ~ 56708077 (-)
G1310167 NA non-coding upstream 177084 56806019 ~ 56806694 (-)
G1310169 NA non-coding upstream 197538 56826473 ~ 56832210 (-)
G1310239 NA non-coding upstream 303261 56932196 ~ 56932643 (-)
G1309187 NA other downstream 565870 56054491 ~ 56055064 (-)
G1308906 NA other downstream 873181 55746285 ~ 55747753 (-)
G1308831 NA other downstream 1064360 55556232 ~ 55556574 (-)
LOC110490337 LOC106609287 other downstream 1468823 55148760 ~ 55155353 (-)
G1310261 LOC106609352 other upstream 342806 56971741 ~ 56973518 (-)
LOC110490385 LOC106576235 other upstream 496879 57125783 ~ 57143499 (-)
LOC110490387 LOC106609365 other upstream 613745 57231181 ~ 57247843 (-)
G1310744 NA other upstream 749904 57295439 ~ 57441427 (-)
G1311818 NA other upstream 1520051 58148986 ~ 58149397 (-)

Expression


Co-expression Network