G1310261 (LOC106609352)


Basic Information

Item Value
gene id G1310261
gene name LOC106609352
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 56971741 ~ 56973518 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1494769
GCAACTCTTACACAGATCTTTATTATAGATTTTTGTGTTGTTTTTACACCACATTGCATATAGGCCATGGCAGTCATATCACAGCCCTTTACTTTTCAGTACAGTTCTTTACCATCCCCTTTTCAAACAGTCAAACCTCATTCATTTTCCTTCTTCAAAACTTTCATAACACCTTCATCTGTTTTCTCCCTATAACATACATAGTCTTTCTTTTCATTTTTCTCACTGGCTTTTGACCAGTGCCTCAAACCTCCATTTTTGGACAAGGCACCACATCACAGCTCCATCATTGCGTGGCTAGTGGCTACACACACCTTGAAAACAAAAACCCCCAACTTCTCAGTTCAAACACATTCAACATTTCCCTCTTTTTTCCACATCTCTTAAGTCTTCTTCTAACATACTCTTTTGCTTTTCTCAACCCATCTTTGTGGTTTCTTTCAGCTATACGTCATCTCCTTAGTAGATCCCAACCCATCAGACAAGCATGTATATGCCCCTGCCAGTACTGTGGCTGGGGAGTGGCAGTGTCAACAACTAAAGCTCCATGTAAGATTGCTACGTTGAAAAGTGATCAATTTTCATTTGGAAGAGTCAGCTTTTTAAACCAACATGGCTCAGTTTAAATTGTTTTTACATTATAGTAAAACAAAATCTCATTTGATATGCGTTTTGACATAAAATTACTACATTCTGTAGCAATTCATGTTTTTTCCCCATTAAAATGCGATTGGATTAAAGTTAATGCCTTCAACTGCAGGTGATGCAAAAAGGTGGCCGGACCATAAAAAAATATCTGTTATTAGGAATGTACAAAAATAAGACCCGTCCTCCAGTACAGCTACAAATCAGACTTATCAAAATGTATAGTTTTCAGTTTCGTATCTCATCTATTGTTGAAACTCTTCCCTTCTATCCACCTCCCCAAAAAGTGTGAAATAACAACAGCAAAAAGATAGAAACAGTGCTGTTTTAAACATAGAGCTACAGTCATTTCAGATTGGGAAAAAAAAGGAGTAAAacttcaattaaaaaaaaatcaaatagtAAACAGGACTATATGCACGACTTCTATCTAATTACTGAAAGCCAAGCAGGCCTCTCCAGAATACTGAATGGTATGCACTTAGCCCCTTTGTGGACAGAACCAAAcagtggagggatggaagggtaaTGTAAATAGCTGCCAATGGGGACAGTAACACAAAACACTGTTGTAATAAACACACAGATGCATAAATAAAAGTCCCATGGGGAGGGgacacacagcccccccccccTCTAATTACACCATGGTCTCCTTCCTCTTCCCTAAAGCACAGAGGGAGCGCTTGTCCTTTTTGGTTTTGTGTTTGGGCGACGGGGAGGATAGtggtgatgaagaggaggatgaggagcggGAGGAGGGAGACGTTGAGGTGGGACTGGGGGTCTCATCCCCGCATAGAGAACTGGAGGCGGAGGTTGCACCTGCGGGCGTCAAAGGGCAGTTCTCGTCGGCCTCCTCCGTGTGGACGACGGAGGAGATTTTGGAGGAGTGCCGCTTGGAGTGGGCGTCGGCTGCCGGGGAGGAAGTGGGCGTGGTGACGTCGGCGGGGTGGTGGACGGAGATGGCGCTGCGCAGGCAGTTGAGCCACTGCTGCTTGTGGAAGACGTCGTTGACCTGCAGCGTGTGGGACTGGCCCCGAGACGGCTCATGGAAACGCACACGGAAGATG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1494769 True 1718 TUCP 0.44 2 56971741 56973518

Neighbor

gene id symbol gene type direction distance location
LOC110490371 LOC106609349 coding downstream 96143 56832325 ~ 56875598 (-)
LOC110490365 LOC106576224 coding downstream 168964 56795350 ~ 56802777 (-)
LOC118938817 NA coding downstream 189225 56779656 ~ 56782516 (-)
LOC110490368 LOC106576221 coding downstream 195206 56711067 ~ 56776535 (-)
LOC110490367 LOC106609343 coding downstream 237030 56732306 ~ 56734711 (-)
LOC110490376 LOC106576228 coding upstream 56626 57030144 ~ 57037055 (-)
LOC110490760 NA coding upstream 63996 57037514 ~ 57039997 (-)
LOC110490378 gdib coding upstream 66270 57039788 ~ 57050771 (-)
LOC110490379 ankrd16 coding upstream 79453 57052971 ~ 57058823 (-)
trnay-gua-5 NA coding upstream 83327 57056845 ~ 57056932 (-)
G1310246 NA non-coding downstream 30475 56940809 ~ 56941266 (-)
G1310245 NA non-coding downstream 30974 56940263 ~ 56940767 (-)
G1310244 NA non-coding downstream 32358 56938991 ~ 56939383 (-)
G1310243 NA non-coding downstream 33305 56938183 ~ 56938436 (-)
G1310242 NA non-coding downstream 34298 56937209 ~ 56937443 (-)
G1310289 NA non-coding upstream 22652 56996170 ~ 56997937 (-)
G1310306 NA non-coding upstream 41985 57015503 ~ 57015838 (-)
G1310620 NA non-coding upstream 89844 57063362 ~ 57065998 (-)
G1310630 NA non-coding upstream 105436 57078954 ~ 57079259 (-)
G1310631 NA non-coding upstream 105906 57079424 ~ 57079856 (-)
G1309187 NA other downstream 916677 56054491 ~ 56055064 (-)
G1308906 NA other downstream 1223988 55746285 ~ 55747753 (-)
G1308831 NA other downstream 1415167 55556232 ~ 55556574 (-)
LOC110490757 LOC106576193 other downstream 1552496 55417169 ~ 55438953 (-)
LOC110490337 LOC106609287 other downstream 1819630 55148760 ~ 55155353 (-)
LOC110490385 LOC106576235 other upstream 152296 57125783 ~ 57143499 (-)
LOC110490387 LOC106609365 other upstream 269162 57231181 ~ 57247843 (-)
G1310744 NA other upstream 405321 57295439 ~ 57441427 (-)
G1311818 NA other upstream 1175468 58148986 ~ 58149397 (-)
G1311869 tsn9 other upstream 1407506 58381024 ~ 58386002 (-)

Expression


Co-expression Network