G1310738


Basic Information

Item Value
gene id G1310738
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 57289874 ~ 57291443 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1495311
TCTTACTAGATGGGAAAGGCAAGAACTTGTACAGTGGGTTGAATAGTGTAAAGCCAGCTTTAAAAATACGTATTGCTTTCCGTTCAGTCTCTAACATAGTCACTACTGTAAgactcacacacacctttttaTCAGATTCAGCCTATTTCAGTGAGCAACTACCTCACTATTTGACTGCTGCATCTATTCAGATCAAGGTGTTCTTTCTATAAGCAGGTTACTGTTTCAGTATGTACAGGTTGCTCCATTCTTAATGATTGTGAAACGATAGCTgcatttatacctggttctagctttgtcctgatcttgtccacgtTCTGTTTGTTCCCACATTTTTTAGACAGGGGTAGAAAATCAAAAGACACATTGTGATCATATCATCCTGTCCACCTCTGGTAGTCAGACACACATTGTGATCATATCATCCTGTCCACCTCTGGTAGTCAGACACACATTGTGATCATATCATCCTGTCCACCTCTGGTAGTCAGACACACATTGTGATCATATCATCCTGTCCACCTCTGGTAGTCAGACACACATTGTGATCATATTATCCTGTCCACCTCTGGTAGTCAGACACACATTGTGATCATGTCATCCTGTCCACCTCTGGTAGTCAGACACACATTGTGATCATATCATCCTGTCCACCTCTGGTAGTCAGACACACATTGTGATCATATCATCCTGTCCACCTCTGGTAGTCAGACACACATTGTGATCATATCATTCTGTCCACCTCTGGTAGTCAGACACACATTGTGATCATATCATCCTGTCCACCTCTGGTAGTCAGACACACATTGGGATCATATCATCCTGTCCACCTCTGGTAGTCAGACACACATTGTGATCATATCATCCTGTCCACCTCTGGTAGTCAGACACACATTGTGATCATATCATCCTGTCCACCTCTGGTAGTCAGACACACATTGTGATCATATCATCCTGTCCACCTCTGGTAGTCAGACACACATTGTGATCATGTCCACCTCTGGTAGTCAGAcacacattgtgatctgattgtgatcatATCATCCTGTCCACCTCTGGTAGTCAGAcacacattgtgatctgattgtgatcatGTCATCCTGTCCACCTCTGGTAGTCAGAcacacattgtgatctgattgtgatcatGTCATCCTGTCCACCTCTGGTAGTCAGAcacacattgtgatctgattgtgatcatGTCATCCTGTCCACCTCTGGTAGTCAGAcacacattgtgatctgattgtgatcatATCATCCTGTCCACCTCTGGTAGTCAGAcacacattgtgatctgattgtgatcatATCATCCTGTCCACCTCTGGTAGTCAGACACacattgtgtctggatatcttacaagtgtagacagatctggacagaaaccatttaaatcatcaTTTTTCCCACCCTataaaatcattgacaggtggcACCGTTGACTGATTACATCAATATGTGTCCaacaataaataaatgaatagcaTTTTGCAAACATAGTTGTGAGATCATTTACATAAAGGAAGGGACCAGAACATTTGGTCACAATGCAGACACAGGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1495311 True 1570 lncRNA 0.43 1 57289874 57291443

Neighbor

gene id symbol gene type direction distance location
LOC118936373 LOC106576240 coding downstream 4443 57270302 ~ 57285431 (-)
LOC110490387 LOC106609365 coding downstream 42052 57231181 ~ 57247843 (-)
LOC110490385 LOC106576235 coding downstream 146379 57125783 ~ 57143499 (-)
LOC110490383 LOC106576231 coding downstream 187930 57096165 ~ 57101944 (-)
LOC110490380 NA coding downstream 221792 57066743 ~ 57068082 (-)
slc26a4 LOC106576239 coding upstream 1698 57293141 ~ 57307151 (-)
LOC110490395 rpap3 coding upstream 196291 57487734 ~ 57494139 (-)
LOC110490399 LOC106576247 coding upstream 241843 57533286 ~ 57556011 (-)
LOC110490402 LOC106576259 coding upstream 373274 57664717 ~ 57719477 (-)
LOC110490404 etv6 coding upstream 428679 57720122 ~ 57737342 (-)
G1310740 NA non-coding downstream 260 57288494 ~ 57289614 (-)
G1310741 NA non-coding downstream 1755 57287780 ~ 57288119 (-)
G1310743 NA non-coding downstream 2267 57287368 ~ 57287607 (-)
G1310735 NA non-coding downstream 21011 57268087 ~ 57268863 (-)
G1310644 NA non-coding downstream 179487 57110181 ~ 57110387 (-)
G1310739 NA non-coding upstream 1028 57292471 ~ 57292825 (-)
G1310744 NA non-coding upstream 3996 57295439 ~ 57441427 (-)
G1310805 LOC106576254 non-coding upstream 170336 57461779 ~ 57463513 (-)
G1310848 LOC106576255 non-coding upstream 175459 57466902 ~ 57467156 (-)
G1310849 NA non-coding upstream 176295 57467738 ~ 57469681 (-)
G1310261 LOC106609352 other downstream 316356 56971741 ~ 56973518 (-)
G1309187 NA other downstream 1234810 56054491 ~ 56055064 (-)
G1308906 NA other downstream 1542121 55746285 ~ 55747753 (-)
G1311818 NA other upstream 857543 58148986 ~ 58149397 (-)
G1311869 tsn9 other upstream 1089581 58381024 ~ 58386002 (-)
LOC110490436 LOC106576293 other upstream 1097892 58389335 ~ 58391339 (-)
G1311920 NA other upstream 1106117 58397560 ~ 58410709 (-)

Expression


Co-expression Network