G1311075


Basic Information

Item Value
gene id G1311075
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 57730001 ~ 57737303 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1495694
TCTTAAATGCACACCTACAAGCTACCATGCTTTCCTTCTCTTTGGGCAAACAGACCACAGAACATGTACATGCTAGATAGAGGTTATTGTTCAAACAGACTAAACAGTGCCAGCTATGCCCTTGAGAGCTTAGAGCCATAGAATACCAACCAAGAACTTAGAATAAATGCAATGTTTCACGTTAACAGACCCTTACAGGATTGAAGGTTTCATATATATGAAATTATGCAAATGTATTAGGAACATACATCAGCCCAGCTAGAGGTTTCAGAGATGTTCAAGTGAATAGCTGTTCTCAGTTTGACCTCATTGTTCAATCCAGAATTATTCTGTACTAAACCACAATGTCATGGAAATTAGCATGTCATCTATGCTAATGACATTTGCAGTAGGCGCTTCACTTAAAAATGTCAACTGCCCATTAGGCCGTTTAAAACCAGAGAAGTTGGTTATATCGATATGAGATAGAAACATCAATTGTAGGGTCAAAATCATCTACAACGTGTAAATAAGATAATTTTGGTCATGAAGACAGTCTCATCCAAAACTGAGTTCTGTAAATGAGTTTGTCGTGACTTACTGGGGGGTTGGGTATGGATTACGGTCATGCCCACTAACACGAGAGGAGCAGCTGTACTAATTGCGCTCCATCAGCTGCACGCGCTCTATCCAATCATAGCAGCCAGAACCTCCAGACTGTGAAACAGATCTGCCCATTACACAGCATCTCAGACGTGTTTACATAAGACAACTGATCTCGCCAACGTTATGTTGAAATAACCCTTGACCCTAAGCCCTTTATGGAGTGGCCACTTGATTATGTTTGATAGTGTCAATCACTCGAGTCGGACACTTTTTGGGGGCAAAATGAGACGATCAGAGAGCACTGCTCAATATTCCAAAACCCATTCGCAAGCATTTTGTATTTCCCGCGACCTGTTttgtaacatgattccctattaAAACACTGCCAGACAGACTCACATTCTGGTAATAGATGGTGAGAAagtaaaaaaatctatttaaataaataacagCACCGAAGCAGACAACTCACCACTGACTTGATAAGATGATTGTGGCCTGGCTGCTCAGTGTGCCTGCTTGTCCCTACTTGCTAGCTTAATTGACAAACACAGAGTTGGAACTTTGCTAGCTAGCAAGTGATTTGTACACTGATAAACAGTGTGTTGCTTGTGTTTTATTTACAATAGTTTGACAGCTTACAGATGATACTGTAAAGATATTATTGTTCTCAGAAATCAGTCCAGAGCGCGGAGCCAGACTTTCCTGGCTCGATAGACTGTATGCAGTGCAGACTAGTTTTTCATGCAAATGTTTTTACTTAAGAattactgcaccaaacaccttagctAGATGCAAAATTGCGCAACTAAGACCTCCTCTGCAAAACCGTCTAAATGAATTAATATTTTGAGGAAGTGGTTGTTGTTGCAACAGTGACTCAGgagggacaaacacctgccaagGTACAATAAACCCATttctgtgtttgcaaacattgcCTCACGAGAGCGATACGCACAAGTTGGTGGCAGAACACGGGGAAGTTCTTATAGAACGCCAGCTTTTGATAGCATTTCACATGACTTTTGGATTTTAAATGGGCCTTTAAGGCTCGTATGAATGTTTGTGTCATCATCGCAAATCAACTGCATTTTACTTTAAAAACATTtcaacttcaaccagtaaaattactctttggctagcttttgcTACAGACTATGTCAATGAGcattagcattctagctaacaactgcGGCATCCAAAACAGTTATTTTGCAAAGATCACAACCAAATTGTCTTATTGACTGTTCAAGCTATAATCAAAACACAATTGTAAGTGTATGAGAaccccaaaaagttattttgtttagaagtaataactCTGGTTTGGCTTCAGTTGTGGTCTCAAGCATTTCTTATTGAGCAATATTCAAAACAAAGCCAAAGGAAGTGCAGTCGCCCTTTAAAGGCAGAATGGGTAGCATTAGCAACATAGCGATGTCTTTTAAGCATCAATCTGTCTGGTGGGCTCAGTTTTCTCCCTGCCTGGTTTAGGGTGGGGAACTATGACCCCCACTTTCCTCCCAAACCCCCTTCCTTCCATGATGGCATGTGGAGTGTTTCAAACAGGAAGAGAAGGGGCTTCTCTCCACTTGGCTGCTGGCATGTGAGAACAGTTTCCCCTTTCAGAGGGAGAAAAGGGAACGAAGggggaaaaacaacaacatttattCAGGAAGCGCCGTCTGCCCACTCAGGAAATTCCTGAGGATGAGAACGGCTTTCCCCTCTGAAAGGCACTGGggtacacacagtcacacatatACAATGACTGCACACACACAAGATACTCAAATACCCTTCTGTGTGTCCTGTACCGTTGATATGCACGCAAACATCTGTACACATACAGAAAGACTCCACAAACGagtatgcaggcacacacacacacagtacaattaCTCACAGAGTGACATGTAGACATGCACACACAAGGAGATCGATTAATACACAAGCACACACCAACTCCAACATGCCTGTACAcaaagacagtcacacacacacacacactcagccacccacccacacacacacacagtagaaaccCAGCTGTGAGCAAAGCAAACTCAATCTATTGAGAAAGGTTTACAAAGAAAAACAGCAGCAAGCCAAGTATCCAAGACGAGGCTTCTTTCTCTGTCACCCAGCAAGAGATTTCTCATGTTCAATAAGCTTCAATGTTTAACGTAAGCTGTACTCTCCATACAAATTCCCATAGACACTCACTCCATATTCTTTGAACTTGTCACAGGTGTCTCAATGTTACCTCCCCATCAGTGCCCGCCCGACTTGTCGTGACGTCAGTAAATAGAGTGAATCCCTTATTGCAGTGAGCCTGAATGACACTGCTACGCTTCTTAGTGTCTGCTAGGCGGGTGACCTTGAGGCTGACACATTGCAAGACAATTAAGTAAACACGATTAATGGAATGGAATTGAGGGTTGAAAAGTCATCCACTTCACTCAAACGCTGACATCTAGTGCAACCAAACAGTATAATCAAGTGTTTTACAGCTGTGCTTATTTTTCTTTTCATGTGCATGTTCTATAGTTCAACAATGAGACAGCTAACAGACAGGAAATTGGAGGATTAACGTGAAAATCCGCCAATGTGATGGAGAAATGTAACTCTTAACTTCACCACTTCAAGAACATTCACCCAGGCAAACCTCTCCCATTCAGAGTGGGGTGGTTTCTAACACTCCTGGCTAAATGGGGTAAAAAGAAGAGAAGCCTTCTTTGAGAGTGAGGAGACGGCTACAACTCACCCCCTGATCTAATCCACTTCCTCCTCAGGAAATGGAGAAGGCGGATTTCTGCCCACACTGCaatttcctctccctctttttcccccccgCTTTCATTCTGTCTTTCAGGAAGAGTGATGGCTTTGAGCCAAACAAGGTTCCAATAAGAGGTTTGGGAACTGTAGGCCTACAGGTGAAGGGTAGTTCATATATTTCACAGAGTTAAAGACAGAGTCAACATGTATAATGGAGGGAAATCTTGCCTAATCTAAAGATTCAAACAAAAAGTTGAATCGAAGCTCACAGTCCAGCAGACCACATTCACCACGCCCAGATAAATGGCCCTAACAGACAACCTCAGACCAAAACAGACATGTTAAACGTTCTTCCTTTTTCTATGGCAATACAGAAGGGGAAGTGGAAATGGGGAATTTCCTCTGTATGGTCCACGTGGATAGACACTACAGGTCATTTCTTTTAGATATTGAGCTTACCACAAAGTGTGTTAATATACTGGTATAATTTAGGAGTACTGTACCATATCTTTgccaaacacaccaacaaaccGGCAATATTTAGGTCAATTACCCTCAAAAGTTCCCACGACAAATCATTGTGCACAAACTAGTAAAATTAACGCTGTTTCCACGTCTTTTCAATGAAATtgcgttgaaccaacgtggaatagacgtttaATTGACggctgtgcccagtgggaagattTATATCCAAACTCACTGAAGAAATACAAAGACGAATCTCACTAGTCTTCAAAGCCCTAAAAGTCATACATGTTAAAAGGTGCCTGGTTAAACATTAATAGTTTTTCACACAGAGCAGGCCCAGTGACTCTACAACTCTATAAACACCCAGTCTATATCCTGGCTGTGATCCAACCCCGCCTGTTGTTTTATTGGCTCAGGCAGTGGCCGGTTGAGACCTGCCGTCAGCTTCACCAGACAGCACACAGTTGTCatgtttcctcctctccttgtctctcttccttcccctctttTTTGAGGCCCTTGGGGATTTTACTGGTCTTAAGAATAGGTTTTTAAAAAACATGGTTTCCACCAATGCTCTCACTTTTCCAACCATGTCAGGTCAATAAACACCTCAAATCGAAGTTTATTCGTCACGTGCACAGGATACAGCGGGTGTAAAtgatacagtgaaattcttacttgctGCTCTTCCTCAACAGTGCAGAATAATGTAAAGTAGCACAGTAAATCAATATACGCATCTGCCCTCTCGATTAAAAATCTTCTCTTTACCTTGCCTCATATTTACAGCCTTCTCCCTGCTTTCCTTCTTGTCCGTCCTGTCCTGTaatacctcactctctctcctatttctaGACTCTTCCCAGCCCAACCCATCTCCTACTTCCTTTCTTCTCCTAAACTCTTTACGTGTTATACTCCTCCATTACACTGGGCTATTATTCTGTGCTGTTCTCTATCCTCTTGTACTGAGCTACCTTGTGTTGTGTGCTGTACTTCAGTACCCTGAGGTGTTAATGTACTGAACACTGCGGTGCTGCCGTGTACTGAGTTGTGTTGGCTgtcactgtcctgctgtgttgaaTTCCACTGTGTAGTGTTCCAGTACAGTGACTCTGCTATGGTCCAGGAAAGACATCTTGTGTTGGTCCTTGACCCTGGGTCTGCTTCAGCACCTCAGAGGAGGGATACATGAGTAGGTCTGTCTGTCCTCatggggagagtgatgccagTTGGAGTGATGACGTGACATGCAAGTAGCTATAGTAAATCATGGCTTTCATTCTGCCATTTTCTGAGGTCAAATGCTCTCAAAACAAATGTTTAAGGGATAAAAAAAATGCAGGCTGAAAAGACAAAGAGATTCGTTTGTTGATTATGACTGCCATGTATTCTCTGTGTGCGCCTGTGGGTGtcatgagttgtgtgtgtgtgtgcgtgtctgcatGTTTGTGTGAGTGACTCACGCAGGTGCACTGGCAGCCTGGCAGGCTCGTCCTCCATTCGGCTGGCTGGCCTGGCCGTGGGAGCATGGACGGGGGAGGAAGTGGAGTTTGGCAGGGGGCTCACGGAGGAAGGACTGAATGAGCGCCTCTCCTTCTTGGTTATGATCTGCGATGACGATTCTGACATGTCTCGCTAAATTCAGGAAGTTCTCCTCTTCCCACTTTCCTTTTCTCGTTCTCCTCTTTGAAATAAACCAGAAAAAAACACCCACACCCGACTCCCTGACTTGGGGATGGTTACAGGGCCACGTAATAAATATGTTTAGGGTTTGTTATCGATCCATTACATAACCATGTTTGTCATAAACGCATGAAAGTTCTTTGTTTTCTGTTGGTGCTGTGCTCTACATTTCGGCGACGCGTTGGTTAATTCTCTTCCTGGAAGACGGGTGTAAAAGGCAGACATCTCCGTGGT

Function

NR:

description
uncharacterized protein LOC101160863 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1495694 True 5763 lncRNA 0.43 2 57730001 57737303
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110490401 LOC106609446 coding upstream 127994 57584513 ~ 57602007 (+)
LOC118936534 LOC106609469 coding upstream 226967 57501658 ~ 57503034 (+)
LOC110490398 NA coding upstream 231221 57496571 ~ 57498780 (+)
LOC110490397 LOC106609441 coding upstream 242265 57486204 ~ 57487736 (+)
LOC110490396 LOC106576256 coding upstream 246544 57480573 ~ 57483457 (+)
LOC110490403 prp12 coding downstream 1236 57738539 ~ 57756086 (+)
LOC110490405 LOC106576261 coding downstream 21496 57758799 ~ 57762803 (+)
LOC110490406 LOC106576262 coding downstream 50959 57788262 ~ 57802998 (+)
LOC110490407 LOC106609462 coding downstream 71358 57808661 ~ 57813420 (+)
LOC110490411 r51a1 coding downstream 127178 57864481 ~ 57868699 (+)
G1311076 NA non-coding upstream 10105 57719675 ~ 57719896 (+)
G1310955 NA non-coding upstream 111401 57618395 ~ 57618600 (+)
G1310556 NA non-coding upstream 123059 57522941 ~ 57606942 (+)
G1310553 NA non-coding upstream 211210 57518562 ~ 57518791 (+)
G1310547 NA non-coding upstream 221071 57508705 ~ 57508930 (+)
G1311126 NA non-coding downstream 113614 57850917 ~ 57859053 (+)
G1311150 NA non-coding downstream 158749 57896052 ~ 57911514 (+)
G1311158 NA non-coding downstream 177348 57914651 ~ 57919915 (+)
G1311170 NA non-coding downstream 199600 57936903 ~ 57937328 (+)
G1310321 gdib other upstream 686739 57039799 ~ 57050944 (+)
G1309787 NA other upstream 815778 56912331 ~ 56914223 (+)
G1309163 LOC100136012 other upstream 1692598 56036902 ~ 56037403 (+)
G1309147 NA other upstream 1713053 56016448 ~ 56016948 (+)
LOC110490357 LOC106609270 other upstream 2146146 55569924 ~ 55583925 (+)
LOC100136741 LOC100136741 other downstream 376847 58102240 ~ 58136639 (+)
LOC110490438 LOC106576294 other downstream 699241 58435813 ~ 58455629 (+)
LOC110490440 LOC106576296 other downstream 739934 58477237 ~ 58505176 (+)
LOC110490442 LOC106609443 other downstream 791611 58514317 ~ 58550337 (+)
LOC110490444 LOC106576210 other downstream 817450 58554753 ~ 58565413 (+)

Expression

G1311075 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 0.8.
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G1311075 Expression in each Bioproject

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G1311075 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 15.
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Co-expression Network