Gene
RNA
| Item | Value |
|---|---|
| gene id | G1311170 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 57936903 ~ 57937328 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1495807 | True | 426 | lncRNA | 0.45 | 1 | 57936903 | 57937328 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514203 | LOC106576268 | coding | upstream | 28732 | 57898842 ~ 57908171 (+) |
| LOC118938927 | LOC106576267 | coding | upstream | 45844 | 57888362 ~ 57891059 (+) |
| LOC110490410 | LOC106576264 | coding | upstream | 55594 | 57872879 ~ 57881309 (+) |
| LOC110490411 | r51a1 | coding | upstream | 68204 | 57864481 ~ 57868699 (+) |
| LOC110490407 | LOC106609462 | coding | upstream | 123483 | 57808661 ~ 57813420 (+) |
| LOC110490416 | LOC106576270 | coding | downstream | 22252 | 57959580 ~ 57965064 (+) |
| LOC110490417 | spic | coding | downstream | 31903 | 57969231 ~ 57971616 (+) |
| LOC110490765 | mybpc1 | coding | downstream | 42586 | 57979914 ~ 58017024 (+) |
| LOC110490419 | LOC106576273 | coding | downstream | 80148 | 58017476 ~ 58035699 (+) |
| LOC100135998 | LOC100135998 | coding | downstream | 125898 | 58063226 ~ 58066442 (+) |
| G1311158 | NA | non-coding | upstream | 16988 | 57914651 ~ 57919915 (+) |
| G1311150 | NA | non-coding | upstream | 25389 | 57896052 ~ 57911514 (+) |
| G1311126 | NA | non-coding | upstream | 77850 | 57850917 ~ 57859053 (+) |
| G1311075 | NA | non-coding | upstream | 199600 | 57730001 ~ 57737303 (+) |
| G1311156 | NA | non-coding | downstream | 18175 | 57955503 ~ 57956765 (+) |
| LOC100136741 | LOC100136741 | non-coding | downstream | 164912 | 58102240 ~ 58136639 (+) |
| pmch | LOC106576280 | non-coding | downstream | 215170 | 58152481 ~ 58154147 (+) |
| LOC110490425 | nup37 | non-coding | downstream | 240630 | 58172956 ~ 58182616 (+) |
| G1311279 | NA | non-coding | downstream | 251895 | 58189223 ~ 58192466 (+) |
| G1310321 | gdib | other | upstream | 893641 | 57039799 ~ 57050944 (+) |
| G1309787 | NA | other | upstream | 1022680 | 56912331 ~ 56914223 (+) |
| G1309163 | LOC100136012 | other | upstream | 1899500 | 56036902 ~ 56037403 (+) |
| G1309147 | NA | other | upstream | 1919955 | 56016448 ~ 56016948 (+) |
| LOC110490357 | LOC106609270 | other | upstream | 2353048 | 55569924 ~ 55583925 (+) |
| LOC110490438 | LOC106576294 | other | downstream | 499216 | 58435813 ~ 58455629 (+) |
| LOC110490440 | LOC106576296 | other | downstream | 539909 | 58477237 ~ 58505176 (+) |
| LOC110490442 | LOC106609443 | other | downstream | 591586 | 58514317 ~ 58550337 (+) |
| LOC110490444 | LOC106576210 | other | downstream | 617425 | 58554753 ~ 58565413 (+) |
