G1314727


Basic Information

Item Value
gene id G1314727
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 60840341 ~ 60840608 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1499860
tcttcacactgTGTGCACAACAGCAGTATATGTGGGCTAAACTGTGGATCATTTTTCATTGCTTTggcacaaaatgcattcaatgactACATCTTTCAAATTTCATAAATTATTTTCTCACTCAGACACAACCACCACAAAAACTCTATGCAGGACAATTTGCACATGTTTACATActcttttcaaaactgttaaacttaAGTTCAAAACCTAACATAACACAACATTGAATAAGACAGCAATTTgctacatttctacagtaataccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1499860 True 268 lncRNA 0.34 1 60840341 60840608

Neighbor

gene id symbol gene type direction distance location
LOC110490487 LOC106576424 coding downstream 143754 60676532 ~ 60696587 (-)
LOC110490486 LOC106576425 coding downstream 237023 60594114 ~ 60603318 (-)
LOC110490773 LOC106576426 coding downstream 273739 60521273 ~ 60566602 (-)
LOC100301656 LOC107590838 coding downstream 339024 60469892 ~ 60501317 (-)
LOC110490483 magi2 coding downstream 415291 60146169 ~ 60425050 (-)
LOC110490490 ptn coding upstream 86026 60926634 ~ 60973072 (-)
LOC110490493 LOC106576421 coding upstream 184038 61024646 ~ 61065011 (-)
LOC110490497 NA coding upstream 227700 61068308 ~ 61071015 (-)
LOC110490496 LOC106609505 coding upstream 235167 61075775 ~ 61080604 (-)
LOC110490499 NA coding upstream 266505 61107113 ~ 61117104 (-)
G1314723 NA non-coding downstream 3676 60836430 ~ 60836665 (-)
G1314720 NA non-coding downstream 8459 60831666 ~ 60831882 (-)
G1314368 NA non-coding downstream 18053 60821990 ~ 60822288 (-)
G1314337 NA non-coding downstream 48192 60791810 ~ 60792149 (-)
G1314317 NA non-coding downstream 58927 60781061 ~ 60781414 (-)
G1314773 NA non-coding upstream 104161 60944769 ~ 60945907 (-)
G1314792 NA non-coding upstream 148424 60989032 ~ 60994320 (-)
G1314798 LOC106576442 non-coding upstream 165055 61005663 ~ 61094637 (-)
G1314799 NA non-coding upstream 247327 61087935 ~ 61090439 (-)
LOC110490506 med21 non-coding upstream 348200 61188370 ~ 61194701 (-)
G1314304 NA other downstream 67853 60772145 ~ 60772488 (-)
G1312865 rps16 other downstream 1416034 59420247 ~ 59424344 (-)
G1312023 NA other downstream 2148959 58634282 ~ 58691382 (-)
LOC110490770 NA other downstream 2211511 58627298 ~ 58684968 (-)
G1311995 NA other downstream 2319762 58519957 ~ 58520579 (-)
G1315398 LOC106609523 other upstream 769812 61610420 ~ 61612116 (-)
G1315509 NA other upstream 994018 61834626 ~ 61836573 (-)
G1315519 NA other upstream 1024422 61865030 ~ 61891421 (-)
G1315518 NA other upstream 1052063 61874995 ~ 62006707 (-)
G1316051 LOC106609550 other upstream 1202162 62042770 ~ 62056023 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G330450 NA non-coding CI01000112 null 4220754 ~ 4221630 (+)