G1314799


Basic Information

Item Value
gene id G1314799
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 61087935 ~ 61090439 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1499937
GGGtaacctggaaggatattgacctcattccatcagtagaggatgcctaggttgttctttaaaagtaaatTCATCTAATCTAATCAACTATATTGAAATGATGAGTGCGCAcccttaaataagcatgccacattcaaataaaattagaaccaggaacagatatagcccttggttctctccagacctgactgcccttgaccagcacaaaaacataccATGGCGTActacattagcatcgaatagcccccacgacTTTTCAGGGAatttaggaaccaatatacacatgcagttgggaaagcaaaggctagcttttttcaaacagaaatttgcttcctgtagcacaaactcaaaaatgttctgggacactgtaaagtccatggagaataagagcacctcctcccagctgcactGAGGCAAGGagacactgtcaccaccgataaattcaggaaaattgagaatttcaataagcatttttctacagctggccatgctttccacctggctacccctagcccggtcaacagccctgcaccccccacagcaaattgtccaaacctcccccatttccccttcacccaaatccagatagctgatgttctgatagAGCTGAAAAATCTGTACCCCTTCAAATCAGccgggctggacaatctggaccctctctctctaaaaatgatcagccgaaattgttgcaacccctattactaccctgttaaacctctctttcgtatcgtctgagatccccaaagattggaaatgctgccgcggtcatccccctcttcaaagggggagacactctagacccaaactgctacagacctatatccatcctaccctgcctttctaaggtcttcgaaagccaagttaacaaacagatcatcgaccatttcgaatcccaccgtaccttctccactatgcaatctggattccgagctggtcatgggtgcacctcagccacgctcaaggtcctaaatgatatcacaaccgccatcaataagagacaaccccaatatttctactttgcacattcatctCCTGCACatctacaattccagtgtttaattgctatattgtatttacttcgccaccattgcctatttattgccttatctcacctcatttgcacacattgtatatagacttgtttttccactgtattattgactgtatgtttgtttactccatgtgtaactgtgttattgtatgtgtcgaactgctttgctttatcttggccaggtcacagttgtaaatgagaacttgttctcaacctgcctacctgattaaataaaggtgaaataaattaaataaatattaaaccACAAGGGTGTACTAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1499937 True 1330 lncRNA 0.43 2 61087935 61090439

Neighbor

gene id symbol gene type direction distance location
LOC110490496 LOC106609505 coding downstream 7331 61075775 ~ 61080604 (-)
LOC110490497 NA coding downstream 16920 61068308 ~ 61071015 (-)
LOC110490493 LOC106576421 coding downstream 22924 61024646 ~ 61065011 (-)
LOC110490490 ptn coding downstream 114863 60926634 ~ 60973072 (-)
LOC110490487 LOC106576424 coding downstream 391348 60676532 ~ 60696587 (-)
LOC110490499 NA coding upstream 16674 61107113 ~ 61117104 (-)
LOC110490500 NA coding upstream 34226 61124665 ~ 61132530 (-)
LOC110490501 LOC106609509 coding upstream 53348 61143787 ~ 61177047 (-)
LOC110490503 LOC106609511 coding upstream 88769 61179208 ~ 61187540 (-)
LOC110490506 med21 coding upstream 97931 61188370 ~ 61194701 (-)
G1314792 NA non-coding downstream 93615 60989032 ~ 60994320 (-)
G1314773 NA non-coding downstream 142028 60944769 ~ 60945907 (-)
G1314727 NA non-coding downstream 247327 60840341 ~ 60840608 (-)
G1314723 NA non-coding downstream 251270 60836430 ~ 60836665 (-)
G1314720 NA non-coding downstream 256053 60831666 ~ 60831882 (-)
G1314876 NA non-coding upstream 136124 61226563 ~ 61290216 (-)
G1314961 NA non-coding upstream 316442 61406881 ~ 61407809 (-)
G1314967 NA non-coding upstream 331372 61421811 ~ 61422016 (-)
G1314969 NA non-coding upstream 334654 61425093 ~ 61426132 (-)
G1314304 NA other downstream 315447 60772145 ~ 60772488 (-)
G1312865 rps16 other downstream 1663628 59420247 ~ 59424344 (-)
G1312023 NA other downstream 2396553 58634282 ~ 58691382 (-)
LOC110490770 NA other downstream 2459105 58627298 ~ 58684968 (-)
G1311995 NA other downstream 2567356 58519957 ~ 58520579 (-)
G1315398 LOC106609523 other upstream 519981 61610420 ~ 61612116 (-)
G1315509 NA other upstream 744187 61834626 ~ 61836573 (-)
G1315519 NA other upstream 774591 61865030 ~ 61891421 (-)
G1315518 NA other upstream 802232 61874995 ~ 62006707 (-)
G1316051 LOC106609550 other upstream 952331 62042770 ~ 62056023 (-)

Expression


Co-expression Network