XLOC_003208 (CR381534.1)



Basic Information


Item Value
gene id XLOC_003208
gene name CR381534.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 6658656 ~ 6678209 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00006322
CAGACACACCTGCACGACACTCCCCTTCTCCAGCACAGGAATTCACACttTTCTCATGGACAATTAAAAGTATCATCAAGATGTGGTTCTGAAGTGATCACAGTGAGCTGCAGATATGGAAAACATG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000098564

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00006322 True 127 lncRNA 0.44 2 6658656 6678209

Neighbor


gene id symbol gene type direction distance location
XLOC_003207 si:dkey-246j7.1 coding upstream 2385 6650966 ~ 6656271 (+)
XLOC_003206 NA coding upstream 16169 6636422 ~ 6642487 (+)
XLOC_003205 NA coding upstream 145638 6460624 ~ 6513018 (+)
XLOC_003204 gadd45ba coding upstream 200908 6456146 ~ 6457748 (+)
XLOC_003203 CU062501.1 coding upstream 214493 6443457 ~ 6444163 (+)
XLOC_003209 pde4cb coding downstream 6759 6684968 ~ 6794144 (+)
XLOC_003210 NA coding downstream 129887 6808096 ~ 6816005 (+)
XLOC_003211 rab3ab coding downstream 140841 6819050 ~ 6850593 (+)
XLOC_003212 BX936438.2 coding downstream 184043 6862252 ~ 6862368 (+)
XLOC_003213 klhl26 coding downstream 202792 6881001 ~ 6895981 (+)
XLOC_003250 BX324177.11 misc downstream 4667594 11345803 ~ 11346099 (+)
XLOC_003255 BX324177.14 misc downstream 4694677 11372886 ~ 11373182 (+)
XLOC_003257 BX324177.13 misc downstream 4708153 11386362 ~ 11386658 (+)
XLOC_003260 BX324177.2 misc downstream 4739824 11418033 ~ 11418323 (+)
XLOC_003262 BX324177.15 misc downstream 4751184 11429393 ~ 11429689 (+)
XLOC_003199 AL840638.2 non-coding upstream 330563 6327978 ~ 6328093 (+)
XLOC_003198 AL840638.1 non-coding upstream 334354 6322998 ~ 6324302 (+)
XLOC_003215 FQ976909.1 non-coding downstream 268382 6946591 ~ 6956379 (+)
XLOC_003216 CR925817.1 non-coding downstream 416967 7095176 ~ 7103536 (+)
XLOC_003217 NA non-coding downstream 470862 7149071 ~ 7152007 (+)

Expression



Co-expression Network