Gene
RNA
| Item | Value |
|---|---|
| gene id | G1315461 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 61733338 ~ 61733753 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1500762 | True | 416 | lncRNA | 0.40 | 1 | 61733338 | 61733753 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490527 | LOC106609530 | coding | downstream | 1391 | 61726204 ~ 61731947 (-) |
| LOC110490534 | LOC106609529 | coding | downstream | 10212 | 61719265 ~ 61723126 (-) |
| LOC110490533 | LOC106609528 | coding | downstream | 14163 | 61715542 ~ 61719175 (-) |
| LOC110490535 | LOC106609526 | coding | downstream | 28587 | 61692661 ~ 61704751 (-) |
| LOC110490526 | pkp2 | coding | downstream | 47559 | 61677551 ~ 61685779 (-) |
| LOC110490519 | LOC106576394 | coding | upstream | 10413 | 61744166 ~ 61759577 (-) |
| LOC110490525 | LOC106576390 | coding | upstream | 58057 | 61791810 ~ 61798497 (-) |
| LOC110490520 | zn12 | coding | upstream | 70300 | 61804053 ~ 61822658 (-) |
| LOC110490521 | LOC106576387 | coding | upstream | 103083 | 61836836 ~ 61842089 (-) |
| LOC110490536 | NA | coding | upstream | 116614 | 61850367 ~ 61861261 (-) |
| G1315459 | NA | non-coding | downstream | 8785 | 61724304 ~ 61724553 (-) |
| G1315402 | NA | non-coding | downstream | 108279 | 61624841 ~ 61625059 (-) |
| G1315401 | NA | non-coding | downstream | 109375 | 61623706 ~ 61623963 (-) |
| G1315400 | NA | non-coding | downstream | 110754 | 61622371 ~ 61622584 (-) |
| LOC110490529 | LOC106576403 | non-coding | downstream | 118227 | 61613937 ~ 61646356 (-) |
| G1315443 | NA | non-coding | upstream | 6775 | 61740528 ~ 61741059 (-) |
| G1315464 | NA | non-coding | upstream | 26322 | 61760075 ~ 61760276 (-) |
| G1315485 | NA | non-coding | upstream | 54602 | 61788355 ~ 61788557 (-) |
| G1315499 | NA | non-coding | upstream | 89389 | 61823142 ~ 61823364 (-) |
| G1315509 | NA | non-coding | upstream | 100873 | 61834626 ~ 61836573 (-) |
| G1315398 | LOC106609523 | other | downstream | 121222 | 61610420 ~ 61612116 (-) |
| G1314304 | NA | other | downstream | 960850 | 60772145 ~ 60772488 (-) |
| G1312865 | rps16 | other | downstream | 2309031 | 59420247 ~ 59424344 (-) |
| G1312023 | NA | other | downstream | 3041956 | 58634282 ~ 58691382 (-) |
| LOC110490770 | NA | other | downstream | 3104508 | 58627298 ~ 58684968 (-) |
| G1315519 | NA | other | upstream | 131277 | 61865030 ~ 61891421 (-) |
| G1315518 | NA | other | upstream | 158918 | 61874995 ~ 62006707 (-) |
| G1316051 | LOC106609550 | other | upstream | 309017 | 62042770 ~ 62056023 (-) |
| G1316178 | NA | other | upstream | 523345 | 62257098 ~ 62264093 (-) |
