G1315519


Basic Information

Item Value
gene id G1315519
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 61865030 ~ 61891421 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1500894
GAGAAGACCAGAAGATGATTTGCATAGTGATGATGCTCTGCATCGACAGCACATGCTTCAGTGGTCTGGGAGTGTTTATATCCCTGTGAGTTTAACACTTCATGACTGAGAGCTGTCCTTCATGACAACAGAACCTACAACAACCATGACTTTTATCACCATCTTTATCTGGACACTTGCTTTCTGCTTCAAGGAATCTAGAGGACAGATCACTGTGACTCAGACACCTACAGTGAAAACTGTTCTCCCCGGACAGCCAGTCTCTATGAACTGTAAAGCCAGCAGTGATGTGTATCCTGACTGTTGGAGTTCAGGTAAACCATGTTTAGCCTGGTATCAACAGAAACCTGGAGGCGCTCCTAAACTACTGGTCTACTATGGAAGCACCCTCTTCTCTGGGACTCCATCTAGATTCAGTGGCACTGGATCTGGGagtgacttcactctgaccatcagtggagtccaggctgaagatgcagGATATTACTACTGTCAGAGTTACCACAGTGGTAATGTGT
>TU1500896
GTCCTTCATGACAACAGAACCTACAACAACCATGACTTTTATCACCATCTTCATCTGGATACTTGTCTTCTGCTTTCAAGaagCCAGAGGACAGTACGTTGTGACACAGACTCCTGCAGTGAAAGCTGTTCTCCCAGGACAGACAGTCTCTCTGAACTGTAAAACCAGCAGTAATGTGAATGGAAATGACCGTCTAGCCTGGTATCAACAGAAACCTGGAGGAGCTCCTAAACTCCTTATTTACTATGCTAAAACACTTCAGTCTGGGACTCCATCTAGATTCAGTGGTAGTGGATCTGGGagtgacttcactctgaccatcagtggagtccaggctgaagatgcagGATATTACTACTGTCAGAGTTACCACAGTGGTAATGTGT
>TU1500893
GTCCTTCATGACAACAGAACCTACAACAACCATGACTTTTATCACCATCTTCATCTGGATACTTGTCTTCTGCTTTCAAGaagCCAGAGGACAGTACGTTGTGACACAGACTCCTGCAGTGAAAGCTGTTCTCCCAGGACAGACAGTCTCTCTGAACTGTAAAACCAGCAGTAATGTGAATGGAAATGACCGTCTAGCCTGGTATCAACAGAAACCTGGAGGAGCTCCTAAACTCCTTATTTACTATGCTAAAACACTTCAGTCTGGGACTCCATCTAGATTCAGTGGTAGTGGATCTCATAGTGACTTCACTAtgaccatcagtggagtccaggctgaagatgcaggagattactactgtcagAGTTTACACTACTCCAACAGTGTCTT

Function

NR:

description
Ig kappa chain V region K29-213

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1500894 False 518 TUCP 0.46 2 61865030 61865660
TU1500896 False 386 TUCP 0.45 3 61865030 61891421
TU1500893 True 390 TUCP 0.44 2 61890884 61891421

Neighbor

gene id symbol gene type direction distance location
LOC110490536 NA coding downstream 3769 61850367 ~ 61861261 (-)
LOC110490521 LOC106576387 coding downstream 22941 61836836 ~ 61842089 (-)
LOC110490520 zn12 coding downstream 42372 61804053 ~ 61822658 (-)
LOC110490525 LOC106576390 coding downstream 66533 61791810 ~ 61798497 (-)
LOC110490519 LOC106576394 coding downstream 105453 61744166 ~ 61759577 (-)
LOC110490558 NA coding upstream 167189 62058610 ~ 62062523 (-)
LOC110490561 LOC106576375 coding upstream 189550 62080971 ~ 62083812 (-)
LOC118938820 NA coding upstream 235117 62126538 ~ 62130465 (-)
LOC118938821 NA coding upstream 238055 62129476 ~ 62129665 (-)
LOC110490564 LOC106609562 coding upstream 274299 62165720 ~ 62169335 (-)
G1315509 NA non-coding downstream 28457 61834626 ~ 61836573 (-)
G1315499 NA non-coding downstream 41666 61823142 ~ 61823364 (-)
G1315485 NA non-coding downstream 76473 61788355 ~ 61788557 (-)
G1315464 NA non-coding downstream 104754 61760075 ~ 61760276 (-)
G1315443 NA non-coding downstream 123971 61740528 ~ 61741059 (-)
G1315537 NA non-coding upstream 12030 61903451 ~ 61912714 (-)
G1315538 NA non-coding upstream 12728 61904149 ~ 61923641 (-)
G1315578 NA non-coding upstream 139712 62031133 ~ 62031489 (-)
G1315579 NA non-coding upstream 140524 62031945 ~ 62032157 (-)
G1315582 NA non-coding upstream 143640 62035061 ~ 62035477 (-)
G1315398 LOC106609523 other downstream 252914 61610420 ~ 61612116 (-)
G1314304 NA other downstream 1092542 60772145 ~ 60772488 (-)
G1312865 rps16 other downstream 2440723 59420247 ~ 59424344 (-)
G1312023 NA other downstream 3173648 58634282 ~ 58691382 (-)
G1315518 NA other upstream 1250 61874995 ~ 62006707 (-)
G1316051 LOC106609550 other upstream 151349 62042770 ~ 62056023 (-)
G1316178 NA other upstream 365677 62257098 ~ 62264093 (-)
G1316323 NA other upstream 642867 62534288 ~ 62537470 (-)
LOC110490571 LOC106596632 other upstream 864261 62754956 ~ 62767499 (-)

Expression


Co-expression Network