G1315522



Basic Information


Item Value
gene id G1315522
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 61867388 ~ 61868018 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1500900
CCATGATCGATCATGAGGTTGGTTACGAACATAAATTACTTTTAATCACGTCAACCATGATCGATCATGAGGTTGGTTACGAACATAAATTACTTGGTACATTCAACAGCTCACTAAAATATTTAAACTTAAGCTGGGCTTTTTCTTAAGGAATAAGTCTTGTTTTTAATTTCAAAACTAGAAAAGTCCTTGTTGCAGCCACTTTCTAGCCTTTGTTGGACTATGGTGATATTTTGGAATGTTCCAGGATCTTACCTGCACACGCTAGACACGCTACAATGCTGTTAGAGTAGTAACCAACACAAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1500900 True 307 lncRNA 0.37 2 61867388 61868018

Neighbor


gene id symbol gene type direction distance location
LOC110490536 NA coding downstream 6127 61850367 ~ 61861261 (-)
LOC110490521 LOC106576387 coding downstream 25299 61836836 ~ 61842089 (-)
LOC110490520 zn12 coding downstream 44730 61804053 ~ 61822658 (-)
LOC110490525 LOC106576390 coding downstream 68891 61791810 ~ 61798497 (-)
LOC110490519 LOC106576394 coding downstream 107811 61744166 ~ 61759577 (-)
LOC110490558 NA coding upstream 190592 62058610 ~ 62062523 (-)
LOC110490561 LOC106576375 coding upstream 212953 62080971 ~ 62083812 (-)
LOC118938820 NA coding upstream 258520 62126538 ~ 62130465 (-)
LOC118938821 NA coding upstream 261458 62129476 ~ 62129665 (-)
LOC110490564 LOC106609562 coding upstream 297702 62165720 ~ 62169335 (-)
G1315509 NA non-coding downstream 30815 61834626 ~ 61836573 (-)
G1315499 NA non-coding downstream 44024 61823142 ~ 61823364 (-)
G1315485 NA non-coding downstream 78831 61788355 ~ 61788557 (-)
G1315464 NA non-coding downstream 107112 61760075 ~ 61760276 (-)
G1315443 NA non-coding downstream 126329 61740528 ~ 61741059 (-)
G1315518 NA non-coding upstream 6977 61874995 ~ 62006707 (-)
G1315537 NA non-coding upstream 35433 61903451 ~ 61912714 (-)
G1315538 NA non-coding upstream 36131 61904149 ~ 61923641 (-)
G1315578 NA non-coding upstream 163115 62031133 ~ 62031489 (-)
G1315579 NA non-coding upstream 163927 62031945 ~ 62032157 (-)
G1315398 LOC106609523 other downstream 255272 61610420 ~ 61612116 (-)
G1314304 NA other downstream 1094900 60772145 ~ 60772488 (-)
G1312865 rps16 other downstream 2443081 59420247 ~ 59424344 (-)
G1312023 NA other downstream 3176006 58634282 ~ 58691382 (-)
G1316051 LOC106609550 other upstream 174752 62042770 ~ 62056023 (-)
G1316178 NA other upstream 389080 62257098 ~ 62264093 (-)
G1316323 NA other upstream 666270 62534288 ~ 62537470 (-)
LOC110490571 LOC106596632 other upstream 887664 62754956 ~ 62767499 (-)

Expression



Co-expression Network