Gene
RNA
| Item | Value |
|---|---|
| gene id | G1315538 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 61904149 ~ 61923641 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1500916 | False | 285 | lncRNA | 0.35 | 2 | 61904149 | 61904533 |
| TU1500917 | False | 285 | lncRNA | 0.35 | 2 | 61904149 | 61904533 |
| TU1500918 | True | 270 | lncRNA | 0.37 | 3 | 61904149 | 61923641 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490536 | NA | coding | downstream | 42888 | 61850367 ~ 61861261 (-) |
| LOC110490521 | LOC106576387 | coding | downstream | 62060 | 61836836 ~ 61842089 (-) |
| LOC110490520 | zn12 | coding | downstream | 81491 | 61804053 ~ 61822658 (-) |
| LOC110490525 | LOC106576390 | coding | downstream | 105652 | 61791810 ~ 61798497 (-) |
| LOC110490519 | LOC106576394 | coding | downstream | 144572 | 61744166 ~ 61759577 (-) |
| LOC110490558 | NA | coding | upstream | 134969 | 62058610 ~ 62062523 (-) |
| LOC110490561 | LOC106576375 | coding | upstream | 157330 | 62080971 ~ 62083812 (-) |
| LOC118938820 | NA | coding | upstream | 202897 | 62126538 ~ 62130465 (-) |
| LOC118938821 | NA | coding | upstream | 205835 | 62129476 ~ 62129665 (-) |
| LOC110490564 | LOC106609562 | coding | upstream | 242079 | 62165720 ~ 62169335 (-) |
| G1315522 | NA | non-coding | downstream | 36131 | 61867388 ~ 61868018 (-) |
| G1315509 | NA | non-coding | downstream | 67576 | 61834626 ~ 61836573 (-) |
| G1315499 | NA | non-coding | downstream | 80785 | 61823142 ~ 61823364 (-) |
| G1315485 | NA | non-coding | downstream | 115592 | 61788355 ~ 61788557 (-) |
| G1315464 | NA | non-coding | downstream | 143873 | 61760075 ~ 61760276 (-) |
| G1315578 | NA | non-coding | upstream | 107492 | 62031133 ~ 62031489 (-) |
| G1315579 | NA | non-coding | upstream | 108304 | 62031945 ~ 62032157 (-) |
| G1315582 | NA | non-coding | upstream | 111420 | 62035061 ~ 62035477 (-) |
| G1316052 | LOC106609550 | non-coding | upstream | 116999 | 62040640 ~ 62042550 (-) |
| G1315519 | NA | other | downstream | 12728 | 61865030 ~ 61891421 (-) |
| G1315398 | LOC106609523 | other | downstream | 292033 | 61610420 ~ 61612116 (-) |
| G1314304 | NA | other | downstream | 1131661 | 60772145 ~ 60772488 (-) |
| G1312865 | rps16 | other | downstream | 2479842 | 59420247 ~ 59424344 (-) |
| G1316051 | LOC106609550 | other | upstream | 119129 | 62042770 ~ 62056023 (-) |
| G1316178 | NA | other | upstream | 333457 | 62257098 ~ 62264093 (-) |
| G1316323 | NA | other | upstream | 610647 | 62534288 ~ 62537470 (-) |
| LOC110490571 | LOC106596632 | other | upstream | 832041 | 62754956 ~ 62767499 (-) |
| G1316451 | NA | other | upstream | 979218 | 62902859 ~ 62904682 (-) |
