G1316051 (LOC106609550)


Basic Information

Item Value
gene id G1316051
gene name LOC106609550
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 62042770 ~ 62056023 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1501505
TCAAAGTTGAAGTCTTCATTCTTTTTATGCTTTATTTAACCATGATCAGTCACATTGAGATCTCTTTTTCAAGTGAGCCCCGGGATTAATGTAGCAATGTGTAACAAAGCTAAATATCCCGATTCAATCAAAGCTAGAAACCAGGCTTCTAGGGTAGGAGAACAACAACCTATTTATTCTATGATGAGAAACCATGAATGATTTAATATGCAATGAGTACAACTTTTTATTTCACTTTAAACACAGAGCTTTGAATGTGTGAGTTCAATCATGTTTACAGGGCAAAATAATGGTGTCTGAATTTGGGCAAAGTATGTATGGGCTAAGTGTGTGCTAAACAAATATTCTAAAGATAATTATATTTGAAAACGCATACAATATCAACATTCTAGACTACAAGTTATGTCAAACTATTTAAACTGTTCACATTAGATATGCAGATTTGTGGCAGTGCAACAAATAAAACTTATCTTCACTGAAAACATGGTGACTGTGACCATGTTGTGCTTATAGACCTTTTAACTGGtcaactgtttttattttattttagtaaGTTAAAGATAatagtttcagtatagttttGTTTGTCAAACCTTGCCTTGTTAATAgttttatttcagtttattaaattgttttttttaatgattcGTTTTCGTGTTAGTTTGCTGTAATAATCTTCTTCCACGCAGACTTGATCATCATGCGGCTGGCTCGGGCCGAGTATGGAGCAGGTCCTTTCCAGGTCTCCCAGTGGAGGCCGGAGGCCCAGCCGATGTGTTCGCCGGCGGGGTGCCAGTCACCGTTCAGGCTGGCAGAGCCACAGCGGCTgtaccaccaccctcctcctccctccgagAAGCTGCACTCGTCCTCGGCGATGTCGCCAAAGATGCAGGGTGAGCAGCCATCATTGTCCTTGTCGGTTGTGCTGAATCCAAAGCCGTTCTGGTCAATGCCTGTGTATTTCCCACGGATGGCA

Function

NR:

description
angiopoietin-related protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1501505 True 979 TUCP 0.40 2 62042770 62056023

Neighbor

gene id symbol gene type direction distance location
LOC110490536 NA coding downstream 181509 61850367 ~ 61861261 (-)
LOC110490521 LOC106576387 coding downstream 200681 61836836 ~ 61842089 (-)
LOC110490520 zn12 coding downstream 220112 61804053 ~ 61822658 (-)
LOC110490525 LOC106576390 coding downstream 244273 61791810 ~ 61798497 (-)
LOC110490519 LOC106576394 coding downstream 283193 61744166 ~ 61759577 (-)
LOC110490558 NA coding upstream 2587 62058610 ~ 62062523 (-)
LOC110490561 LOC106576375 coding upstream 24948 62080971 ~ 62083812 (-)
LOC118938820 NA coding upstream 70515 62126538 ~ 62130465 (-)
LOC118938821 NA coding upstream 73453 62129476 ~ 62129665 (-)
LOC110490564 LOC106609562 coding upstream 109697 62165720 ~ 62169335 (-)
G1316052 LOC106609550 non-coding downstream 220 62040640 ~ 62042550 (-)
G1315582 NA non-coding downstream 7293 62035061 ~ 62035477 (-)
G1315579 NA non-coding downstream 10613 62031945 ~ 62032157 (-)
G1315578 NA non-coding downstream 11281 62031133 ~ 62031489 (-)
G1315518 NA non-coding downstream 36063 61874995 ~ 62006707 (-)
G1316122 NA non-coding upstream 74598 62130621 ~ 62132344 (-)
G1316145 NA non-coding upstream 135141 62191164 ~ 62191587 (-)
G1316142 NA non-coding upstream 165791 62221814 ~ 62224615 (-)
G1316174 NA non-coding upstream 194170 62250193 ~ 62250404 (-)
G1315519 NA other downstream 151349 61865030 ~ 61891421 (-)
G1315509 NA other downstream 206564 61834626 ~ 61836573 (-)
G1315398 LOC106609523 other downstream 430654 61610420 ~ 61612116 (-)
G1314304 NA other downstream 1270282 60772145 ~ 60772488 (-)
G1316178 NA other upstream 201075 62257098 ~ 62264093 (-)
G1316323 NA other upstream 478265 62534288 ~ 62537470 (-)
LOC110490571 LOC106596632 other upstream 699659 62754956 ~ 62767499 (-)
G1316451 NA other upstream 846836 62902859 ~ 62904682 (-)
G1316904 LOC106609576 other upstream 1230484 63256527 ~ 63287904 (-)

Expression


Co-expression Network