G1316142


Basic Information

Item Value
gene id G1316142
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 62221814 ~ 62224615 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1501613
TTTTATTTTTCATCAGTAGCTCAGCAGCTTTGACAGACAAATATTACAAATCCTTTTATTTTGTACACAGGTTATCAGGAGCTGAGCAGGTCAAGGGAGGAGCTATTGTAATGAGGGGGCGGGTCAATTCGGACAAGGAAGTGGATGAGAAAGTTAGAAACTCCAGAGAGGGCAGCCTTTACAGTACAATCAAGCATTCAAATCCTAACTGCCATTCAAATCTTGTCAGTGTTGAGCAGGTAAGTGAACCAGCATCGTatcaaggtagagagagaggacagcgcAGCTTGGAAAGACATTCAGCTGGACTGAACTAGGCCTAGGCTGAGCTAGGTCCACAATTTGGATAGTTAAGGACTTTAAAGTAGAAAAATGATGTATTCCCAAACTGCCCTTTTTGAAGGACTAGGATGCGGTCATTCGAGTGAGCCTGCCAGTGAAAACCAAAGGAAGACCAGTTGCCATCGTTGGTGTAAACAGACCTACCTTTTCCTTATTCGGTTTTGTTTTAGGGTAGTTGTGTTTTTACTTGATCTAATTTCCATACGGGAACAGAGAACCTGCAGACTGCACCTTTAAAGAGAGGCAAGCCATTGTAATCCGTCAGCAAATCTCATGCTACTACTGGAAACGTCCCTGTGTAAGACGTGATGCTTCAGACAGAACTGCCTTCTGACTGAATTCTATGTGAGCCAAAAGCGTGCTCCAACGGGGAAATAAAACTCTATTCTACAACACTCCAAGGCTTCCCCAACAGACAAGCATGGAGCAGCAGATATGGGCATGACGTCACGTTGGTGAAAAACTACATGTAGGATTATGCAAATATAGAATGCACGCACAGAAAAGCACATGCCTGTTTCCCCTCCTGCATTTGGAGGAGTTACCTAACGTAGCAGGAGTAAAATAAACACCTGACACTGGATCTTCTACAACAAATCTTGACAAgaagggagaaggggggggggggggtcagggaggttctcttctgcaccattcaaccaatccagtacatgtggaggagaagatggagcgtCACCTTGTTAATGTCCAAAAGTGGAAGTTGCGTCACAggctctttccatttccccttaAAACCGGATCGTCCGGTGTTGGGCTCTGCAGAGGCTAGGCGAGAGCTGTATTCATTAGTCGCAGACCTTTGcaaaaaacgttttgctacggaAACCATTTACTCTAGGAactaaacggaagcaaacaaCGCAAACGGaacctacctgaatttgtccaatcgttgcaaaacgttttctgTTTGGGTAAATGTTTTTAGTTAcaaaacattttgaacagaaaataCATTCTGTAAAGGAATCCaaataatgaatacaccccaggctTTATCCTCATAGGAGAATAGAGATGTTCCATATTAGTGTTCTTTCCACTCATTGGATAATCGAGAGATGACAGGGTAGTGTTCTCAACCGGATTGGACGATGCTTTCGTCCAGGGATCGTATTTACAGTGAATGTAGTTCAAAAGTGCTGGACACACAACTAGCTATTTACATGTAGAAAAATAGTGGGGAATAAACAGTGCAGTGGGACATCATGGGCATTGTAGACATTAACTAGATGGAATGGAAGAAAAGTACATGTGAAAATATATAATTGTATATTTTCCCTTTTCAATTAATTGAAATGCTTGTTTTAGTTACATGACAAATACATGTTAAACACACTGCACAACCATTCAGAATTCTGTAGAAAACATTGTGTACGCTTTGCCCCTCATAAGTACATTACCATACACACACCAAATACAATTGGTTCAGCGCTAGATACATTTTTTTCCATAAGCACCAAATGACATGTTCAGTTTCAGCGCAGTGCAAAATAAGTCTATTTTTAAGACATTCCTCCTGTTTAATTTAGATttgtcccctctccccttcatCCCTCCTTATGCTCCCATATTTAGGAGGCTGCTCTGGCTTGCAGAGTCGGATTACTGGAGAGACTGAACACTAACTTACTGCATAAAGAGAGAAACTCAAAACAAGCACAACAATCATGTAAAACTAGCATGTGTACTGCAGTCCTAGTCCCAGCCCAGGGATGACACGGCAGCACTGTATCGAGGAGGGGATGAAAGTCTAACACTGTCCACTCTCCAGTTCCTGAGATGAGGGTGGTAGTGAAAAAGTAGCCCTACTCTAGTTCtcagggactgtgtgtgtgtgtgtgtgttaaggagtAGACttcatggactgtgtgtgtgtggtctagttCTTAGGCGACCAGCCCTTCATCAGAACAGGCTTGAATGACCTGGCTGATGCTTGAATAATACTTGTGTGATGCTATATCAAGTAGCTGCAGTATCCagcaccccctctctcctctctgcttcccCCCTGTGGTGATATGCAGCACTACAGACTGGTGGTCACTGGGCCTCTGGTGGCCTACCCTAGCTGCTGTTCACTTTGAGAGTCTTCATGCGGTGTAACAGGGAGTCCTTCTCCATTTGGGCCTCAGCTAGAGCCATCTTGGCTTTGGAGAGCTCCAGTTTCAAACACTCGTTC

Function

NR:

description
PREDICTED: UHRF1-binding protein 1-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1501613 True 2548 lncRNA 0.44 3 62221814 62224615

Neighbor

gene id symbol gene type direction distance location
LOC110490564 LOC106609562 coding downstream 52479 62165720 ~ 62169335 (-)
LOC118938820 NA coding downstream 91349 62126538 ~ 62130465 (-)
LOC118938821 NA coding downstream 92149 62129476 ~ 62129665 (-)
LOC110490561 LOC106576375 coding downstream 138002 62080971 ~ 62083812 (-)
LOC110490558 NA coding downstream 159291 62058610 ~ 62062523 (-)
LOC110490568 LOC106609566 coding upstream 411023 62633205 ~ 62712367 (-)
LOC110490570 LOC106609586 coding upstream 504609 62729224 ~ 62740135 (-)
LOC110490571 LOC106596632 coding upstream 530341 62754956 ~ 62767499 (-)
LOC110490778 fut9 coding upstream 550081 62774696 ~ 62776771 (-)
LOC118938823 NA coding upstream 595471 62820086 ~ 62821153 (-)
G1316145 NA non-coding downstream 30227 62191164 ~ 62191587 (-)
G1316122 NA non-coding downstream 89470 62130621 ~ 62132344 (-)
G1316052 LOC106609550 non-coding downstream 179264 62040640 ~ 62042550 (-)
G1315582 NA non-coding downstream 186337 62035061 ~ 62035477 (-)
G1316174 NA non-coding upstream 25578 62250193 ~ 62250404 (-)
G1316178 NA non-coding upstream 32483 62257098 ~ 62264093 (-)
G1316180 NA non-coding upstream 46446 62271061 ~ 62271294 (-)
G1316192 NA non-coding upstream 65701 62290316 ~ 62290554 (-)
G1316194 NA non-coding upstream 66895 62291510 ~ 62291756 (-)
G1316051 LOC106609550 other downstream 165791 62042770 ~ 62056023 (-)
G1315518 NA other downstream 248119 61874995 ~ 62006707 (-)
G1315519 NA other downstream 330393 61865030 ~ 61891421 (-)
G1315509 NA other downstream 385608 61834626 ~ 61836573 (-)
G1315398 LOC106609523 other downstream 609698 61610420 ~ 61612116 (-)
G1316323 NA other upstream 309673 62534288 ~ 62537470 (-)
G1316451 NA other upstream 678244 62902859 ~ 62904682 (-)
G1316904 LOC106609576 other upstream 1061892 63256527 ~ 63287904 (-)

Expression


Co-expression Network