G1315670


Basic Information

Item Value
gene id G1315670
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 62240101 ~ 62240307 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1501071
ggtggcctttctcaatagcaaggctatgctcactgagtctgtacatagtcaaagatttccttacgtttgggtcagtcacagtggtcaggtattctgccgctgtgtactctctgtttagggccaaatagcattctagtttgttctgtttttttgtaaattctttccaatgtgtcaagtatttttatttttatttctcatgattttgtt

Function

NR:

description
PREDICTED: uncharacterized protein LOC104955046

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1501071 True 207 lncRNA 0.38 1 62240101 62240307

Neighbor

gene id symbol gene type direction distance location
LOC110490566 LOC106609564 coding upstream 17135 62171687 ~ 62224624 (+)
LOC110490565 LOC106576370 coding upstream 75614 62158298 ~ 62164487 (+)
LOC110490562 LOC106576371 coding upstream 84676 62139914 ~ 62155425 (+)
pacsin2 LOC106576372 coding upstream 100335 62094087 ~ 62139766 (+)
ttll1 LOC106576374 coding upstream 146275 62083863 ~ 62093826 (+)
LOC118938822 NA coding downstream 315822 62556129 ~ 62557834 (+)
depdc4 LOC106609043 coding downstream 546320 62786627 ~ 62792739 (+)
scyl2 scyl2 coding downstream 552607 62792914 ~ 62816834 (+)
LOC110490575 LOC106609039 coding downstream 603829 62844136 ~ 62850292 (+)
impdh1b LOC106576497 coding downstream 1058041 63298348 ~ 63327816 (+)
G1315669 NA non-coding upstream 37 62239851 ~ 62240064 (+)
G1315654 NA non-coding upstream 21787 62217329 ~ 62218314 (+)
G1315377 NA non-coding upstream 204045 62035795 ~ 62036056 (+)
G1315308 NA non-coding upstream 214104 62024699 ~ 62025997 (+)
G1315676 NA non-coding downstream 6908 62247215 ~ 62247441 (+)
G1315678 NA non-coding downstream 8624 62248931 ~ 62249206 (+)
G1315686 NA non-coding downstream 24906 62265213 ~ 62265430 (+)
G1315690 NA non-coding downstream 31989 62272296 ~ 62272847 (+)
G1315694 NA non-coding downstream 38564 62278871 ~ 62279412 (+)
G1315616 NA other upstream 92941 62100972 ~ 62147160 (+)
LOC110490560 LOC106609558 other upstream 159441 62077976 ~ 62080953 (+)
LOC110490554 LOC106576378 other upstream 184785 62053220 ~ 62055992 (+)
G1315290 NA other upstream 233380 61897853 ~ 62006721 (+)
G1315291 NA other upstream 327687 61887064 ~ 61912414 (+)
G1315679 NA other downstream 16827 62257134 ~ 62264016 (+)
LOC110490567 anks1b other downstream 174918 62231272 ~ 62589732 (+)
G1315860 NA other downstream 374488 62614795 ~ 62615187 (+)
G1316007 LOC100301653 other downstream 681397 62921704 ~ 62932522 (+)
LOC110490586 LOC106609575 other downstream 1144101 63383366 ~ 63385748 (+)

Expression


Co-expression Network