G1316178


Basic Information

Item Value
gene id G1316178
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 62257098 ~ 62264093 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1501657
agaaagagagagacaaagagacagagaaagaaacagagaacgagagaaacagagagacagagaatgagagaaacagacagagaacgagagaaacagagagacagagaacgagagaaacagagagacagaacgagagaaacagagagacagaacgagagaaacagagagacagagagacagaaagaaacagagaacgagagaaacagagaaagagagaaacagagagacagagagaaacagagagacagagaacgagagaaacagagagacagataaagagagaaagagagacagagaaagagagacaaagagacagagaaagaaacagagaacgagagaaacagagacagagagacagaaagagagagacaaagagacagagaaagagagacagagaaagagagagacaaagagacagagagacagagaaagagagagacaaagagacagagacagagaaagaaagagacaaagagacagagagacagagaaagagagacagagaaagaaacagaacgagagaaacagagagacagagaacgagagaaacagagcgaaacagagagacagagagaaacagagaaacagacaaacagacaaacagacagagagacagacaaacagagagacagacaaacagacaaacagagagacagagagacagagagacagagaaaaagggaaacagagagagagaaacagagagaaccagagaaaaagggaaacagagaaacagagagaaacagagaaagaaacagagaacgagagaaacagagagacagagagacagacaaagagagagacaaagagacagagagacagagaaacagagaaacagaaagaaacagagaacgagagagacagacaaacagagaacgagagaaacagagagacagagaatgagagaaacagacagacagagaacgagagaaagagaacgagagaaacagagagacagagaacgagagaaacagagagacagagaatgagagaaacagagagacagagaacgagagaaacagagagacagagaacgagagaaacagagagacagagaacgagagaaacagagagacagagaacgagagaaacagagagacagaacgagagaaacagagagacagagaacaagagaacagagaacgagagaaacagagaacgagagaaacagagagacagagaacgagagaaacagagagacagagaacgagagaaacagagagacagaacgagagaaacagagagacagagaacgagagaaacagagaacgagacaaacagagagacagagaacgagagaaacagagagacagagaacgagagaaacagagcgacagagaacgagagaaacagagaacgagagaaagagagacagacaaacagagagagagacaaacagagagacagacaaacagagagacagacaaacagagacagacaaacagagagacagacaaacagagagacagacaaacagagagagagacaaacagagagacagacaaacagagagacagacaaacagagatacagacaaacagagagacagagagagagacagagagagacagagacagacagagagacagagacagagagacagacaaccagagaaccagagaaccagagaaccagagacagagagaaacagagacagagagaaacagagagacagagagaaacagagagacagagagaaagagacagacacagagagacagagacacagagaaacagagagagagaaacagagagacagagaaagagaaacagagagacagagagagatagaaacagagagacagagagacagagaaacagagagacagagatacagagagagttagaaacagagagacagagagaccgcccatctgacaaccccctcacacccactgaggacaaacacaagacacagattgtactacttatggactcaaatgggaaatatatagaaggaaaaaaa
>TU1501658
cagagaaacagagagacagagagaaacaaagagacagagagaaacagagacagagagacagagaaacagagagacagagagaaacagagagacagagaaacagagagacagagagaaacagagagacagagagaaacagagacagagagaaacagagacagagagaaacagagacagagagacagagagacagagaaacagagagaaacagagagacagagagaaacagagacagaacgagagaaacagacaaacaggcaaacagacaaacagagagacagagagacagacaaacagacaaacagacaaacagacagacagagacagagagacagagagacagagagacagagagacagagaaacagagaaagagagaaccagCGAAAAagggaaacagagaaacagagaacgagagaaacagagagacagagagacagaaagagagagacaaagagacagagaaagagagacagagaaagagagagacaaagagacagagagacagagaaacagagaaacagagagaaacagagaacgagagatacagacaaacagagaacgagagaaacagagagacagagaacaagagaaacagagaacgagagaaacagagaacgagagaaacagagagacagagaacgagagaaacagagagacagagaacgagagaaacagagagacagaacgagagaaacagagacagagaacgagagaaacagagagacagagaacgagagaaacagagagacagagaacgagagaaacagagaacgagacaaacagagagacagagaacgagagaaacagagagacagagaacgagagaaacagagcgacagagaacgagagaaacagagcgacagagaacgagagaaacagagaacgagagaaagagagacagacaaacagagagagagacaaacagagagacagacaaacagagagacagacaaacagagacagacaaacagagagacagacaaacagagagacagacaaacagagagagagacaaacagagagacagacaaacagagagacagacaaacagagatacagacaaacagagagacagagagagagacagagagagacagagacagacagagagacagagacagagagacagacaaccagagaaccagagaaccagagaaccagagacagagagaaacagagacagagagaaacagagagacagagagaaacagagagacagagagaaagagacagacacagagagacagagacacagagaaacagagagagagaaacagagagacagagaaagagaaacagagagacagagagagatagaaacagagagacagagagacagagaaacagagagacagagatacagagagagttagaaacagagagacagagagaccgcccatctgacaaccccctcacacccactgaggacaaacacaagacacagattgtactacttatggactcaaatgggaaatatatagaaggaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1501657 False 1966 TUCP 0.44 12 62257098 62264030
TU1501658 True 1494 lncRNA 0.44 9 62257098 62264093

Neighbor

gene id symbol gene type direction distance location
LOC110490564 LOC106609562 coding downstream 87763 62165720 ~ 62169335 (-)
LOC118938820 NA coding downstream 126633 62126538 ~ 62130465 (-)
LOC118938821 NA coding downstream 127433 62129476 ~ 62129665 (-)
LOC110490561 LOC106576375 coding downstream 173286 62080971 ~ 62083812 (-)
LOC110490558 NA coding downstream 194575 62058610 ~ 62062523 (-)
LOC110490568 LOC106609566 coding upstream 371545 62633205 ~ 62712367 (-)
LOC110490570 LOC106609586 coding upstream 465131 62729224 ~ 62740135 (-)
LOC110490571 LOC106596632 coding upstream 490863 62754956 ~ 62767499 (-)
LOC110490778 fut9 coding upstream 510603 62774696 ~ 62776771 (-)
LOC118938823 NA coding upstream 555993 62820086 ~ 62821153 (-)
G1316174 NA non-coding downstream 6694 62250193 ~ 62250404 (-)
G1316142 NA non-coding downstream 32483 62221814 ~ 62224615 (-)
G1316145 NA non-coding downstream 65511 62191164 ~ 62191587 (-)
G1316122 NA non-coding downstream 124754 62130621 ~ 62132344 (-)
G1316180 NA non-coding upstream 6968 62271061 ~ 62271294 (-)
G1316192 NA non-coding upstream 26223 62290316 ~ 62290554 (-)
G1316194 NA non-coding upstream 27417 62291510 ~ 62291756 (-)
G1316195 NA non-coding upstream 29218 62293311 ~ 62293574 (-)
G1316200 NA non-coding upstream 43454 62307547 ~ 62328408 (-)
G1316051 LOC106609550 other downstream 201075 62042770 ~ 62056023 (-)
G1315518 NA other downstream 283403 61874995 ~ 62006707 (-)
G1315519 NA other downstream 365677 61865030 ~ 61891421 (-)
G1315509 NA other downstream 420892 61834626 ~ 61836573 (-)
G1315398 LOC106609523 other downstream 644982 61610420 ~ 61612116 (-)
G1316323 NA other upstream 270195 62534288 ~ 62537470 (-)
G1316451 NA other upstream 638766 62902859 ~ 62904682 (-)
G1316904 LOC106609576 other upstream 1022414 63256527 ~ 63287904 (-)
G1318092 NA other upstream 1818944 64083037 ~ 64083888 (-)

Expression


Co-expression Network