G1315679


Basic Information

Item Value
gene id G1315679
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 62257134 ~ 62264016 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1501080
aagtagtacaatctgtgtcttgtgtttgtcctcagtgggtgtgagggggttgtcagatgggcggtctctctgtctctctgtttctaactctctctgtatctctgtctctctgtttctctttctctgtctctctgtctctctgtttctatctctctctgtctctctgtttctctttctctgtctctctgtttctctttctctgtctctctgtttctctctctctgtttctctttctctgtctctctgtctctctgtttctatctctctctgtctctctgtttctctttctctgtctctctgtttctctctctctgtttctctgtgtctctgtctctctgtgtctgtctctttctctctgtctctctgtttctctctgtctctctgtttctctctgtctctgtttctctctgtctctggttctctggttctctggttctctggttgtctgtctctctgtctctgtctctctgtctgtctctgtctctctctgtctctctctctgtctctctgtttgtctgtatctctgtttgtctgtctctctgtttgtctgtctctctgtttgtctctctctctgtttgtctgtctctctgtttgtctgtctctctgtttgtctgtctctgtttgtctgtctctctgtttgtctgtctctctgtttgtctctctctctgtttgtctgtctctctttctctcgttctctgtttctctcgttctctgtcgctctgtttctctcgttctctgtcgctctgtttctctcgttctctgtctctctgtttctctcgttgtctgtctctctgtctctctgtctctctgtctctctgtctgtctctgtctctctctgtctctctctctgtctctctgtttgtctgtatctctgtttgtctgtctctctgtttgtctctctctctgtctgtctctgtctctctctgtctctctctctgtctctctgtttgtctgtctctctgtttgtctgtatctctgtttgtctgtctctctgtttgtctgtctctctgtttgtctgtctctctgtttgtctgtctctgtttgtctgtctctctgtttgtctgtctctctttctctcgttctctgtttctctcgttctctgtcactctgtttctctcgttctctgtcgctctgtttctctcgttctctgtctctctgtttctctcgttctctgtctctctgtttctctcgttctctgtctctctgtttatctcgttctctgtctctctgtttgtctcgttctctgtttctctcgttctctgtctctctgtttctctcgttctctgtctctctgtttctctcgttctctgtctctgtttctctcgttctgtctctctgtttctctcgttctctgtctctctgtttctctcgttctctgtctctctgtttctctcgttctctgtttctctcgttctctgtttctcttgttctctgtctctctgtttctctcgttctctgtttgtctgtatctctcgttctctgtttctctctgtttctctgtttccctttttctctgtctctctgtctctctgtctctctgtttgtctctctgtctctctgtctgtttgtctctctgtctctctctgtttgtctgtttgtctgtttctctgtttctctgtttctttctgtctctctgtttcgctctgtttctctcgttctctgtctctctgtttctctcgttctgtttgtctgtctctctcgttctctgtttgtctgtctctctgtttctctgtctctctcgttctctgtctctctgtttctctcgttctctgtctctctgtttctctcgttctctgtctctctgtttgtctcgttctctgtttctctcgttctctgtctctctgtttctctcgttctctgtctctctgtttctctcgttctctgtctctgtttctctcgttctgtctctctgtttctctcgttctctgtctctctgtttctctcgttctctgtctctctgtttctctcgttctctgtttctctcgttctctgtttctctcgttctctgtctctctgtttctctcgttctgtctctctgtttctctcgttctctgtctctctgtttctctcgttctctgtctctctgtttctctcgttctctgtctctctgtttctctcgttctctgtctctctgtttctctcattctctgtctctctgtttctctcgttctctgtctctctgtttctctcgttctctttctctcgttctctgtctgtctgtttctctcattctctgtctctctgtttctctcgttctctgtttgtctgtctctctcgttctctgtttctttctgtttctctgtttctctgtctctctgtctctttgtctctctctttctctgtctctttctctgtctctttgtctctctctttctgtctctctgtctctgtttctctcgttctctgtttctttctctgtctctttgtctctctttctctgtctctctttctctctttatctgtctctctgtttctctcgttctctgtctctctgtttctctctgtctctctgtttctctctttctctgtttctctcgttctctgtttctttctgtctctctgtctctctgtttctctcgttctgtctctctgtttctctcgttctgtctctctgtttctctcgttctctgtctctctgtttctctcgttctctgtctgtttctctcattctctgtctctctgtttctctcgttctgtgtctctctgtttctctcgttctctgtttctttctctgtctcttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1501080 True 2741 TUCP 0.45 6 62257134 62264016

Neighbor

gene id symbol gene type direction distance location
LOC110490566 LOC106609564 coding upstream 34168 62171687 ~ 62224624 (+)
LOC110490565 LOC106576370 coding upstream 92647 62158298 ~ 62164487 (+)
LOC110490562 LOC106576371 coding upstream 101709 62139914 ~ 62155425 (+)
pacsin2 LOC106576372 coding upstream 117368 62094087 ~ 62139766 (+)
ttll1 LOC106576374 coding upstream 163308 62083863 ~ 62093826 (+)
LOC118938822 NA coding downstream 292113 62556129 ~ 62557834 (+)
depdc4 LOC106609043 coding downstream 522611 62786627 ~ 62792739 (+)
scyl2 scyl2 coding downstream 528898 62792914 ~ 62816834 (+)
LOC110490575 LOC106609039 coding downstream 580120 62844136 ~ 62850292 (+)
impdh1b LOC106576497 coding downstream 1034332 63298348 ~ 63327816 (+)
G1315678 NA non-coding upstream 7928 62248931 ~ 62249206 (+)
G1315676 NA non-coding upstream 9693 62247215 ~ 62247441 (+)
G1315670 NA non-coding upstream 16827 62240101 ~ 62240307 (+)
G1315669 NA non-coding upstream 17070 62239851 ~ 62240064 (+)
G1315686 NA non-coding downstream 1197 62265213 ~ 62265430 (+)
G1315690 NA non-coding downstream 8280 62272296 ~ 62272847 (+)
G1315694 NA non-coding downstream 14855 62278871 ~ 62279412 (+)
G1315695 NA non-coding downstream 15436 62279452 ~ 62279684 (+)
G1315698 NA non-coding downstream 17068 62281084 ~ 62281303 (+)
G1315616 NA other upstream 109974 62100972 ~ 62147160 (+)
LOC110490560 LOC106609558 other upstream 176474 62077976 ~ 62080953 (+)
LOC110490554 LOC106576378 other upstream 201818 62053220 ~ 62055992 (+)
G1315290 NA other upstream 250413 61897853 ~ 62006721 (+)
G1315291 NA other upstream 344720 61887064 ~ 61912414 (+)
LOC110490567 anks1b other downstream 151209 62231272 ~ 62589732 (+)
G1315860 NA other downstream 350779 62614795 ~ 62615187 (+)
G1316007 LOC100301653 other downstream 657688 62921704 ~ 62932522 (+)
LOC110490586 LOC106609575 other downstream 1120392 63383366 ~ 63385748 (+)
G1317320 NA other downstream 1549824 63813840 ~ 63814369 (+)

Expression


Co-expression Network