G1316230 (LOC100194703)



Basic Information


Item Value
gene id G1316230
gene name LOC100194703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 62402181 ~ 62402417 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1501712
ggatgtgttggtaccattctttattcatggctgtgtacttaggtaaaattgtgagtgagcccactcccttggctgagaagcaaccccacatggtctcaggatgctttactgttggcatgacacaggactgatggtagtgctcaccttgtcttctccggacaagcttttttccagatgccccaaacaatctgaaaggggattcatcagagaaaatgaatttaccccagtcctcagcag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1501712 True 237 lncRNA 0.47 1 62402181 62402417

Neighbor


gene id symbol gene type direction distance location
LOC110490564 LOC106609562 coding downstream 232846 62165720 ~ 62169335 (-)
LOC118938820 NA coding downstream 271716 62126538 ~ 62130465 (-)
LOC118938821 NA coding downstream 272516 62129476 ~ 62129665 (-)
LOC110490561 LOC106576375 coding downstream 318369 62080971 ~ 62083812 (-)
LOC110490558 NA coding downstream 339658 62058610 ~ 62062523 (-)
LOC110490568 LOC106609566 coding upstream 233221 62633205 ~ 62712367 (-)
LOC110490570 LOC106609586 coding upstream 326807 62729224 ~ 62740135 (-)
LOC110490571 LOC106596632 coding upstream 352539 62754956 ~ 62767499 (-)
LOC110490778 fut9 coding upstream 372279 62774696 ~ 62776771 (-)
LOC118938823 NA coding upstream 417669 62820086 ~ 62821153 (-)
G1316217 NA non-coding downstream 40178 62358286 ~ 62362003 (-)
G1316200 NA non-coding downstream 73773 62307547 ~ 62328408 (-)
G1316201 NA non-coding downstream 93751 62307771 ~ 62308430 (-)
G1316195 NA non-coding downstream 108607 62293311 ~ 62293574 (-)
G1316194 NA non-coding downstream 110425 62291510 ~ 62291756 (-)
G1316236 NA non-coding upstream 9798 62412215 ~ 62412783 (-)
G1316276 NA non-coding upstream 67466 62469883 ~ 62485399 (-)
G1316281 NA non-coding upstream 74928 62477345 ~ 62478039 (-)
G1316330 NA non-coding upstream 144446 62546863 ~ 62551018 (-)
G1316332 NA non-coding upstream 154869 62557286 ~ 62562789 (-)
G1316178 NA other downstream 138151 62257098 ~ 62264093 (-)
G1316051 LOC106609550 other downstream 346158 62042770 ~ 62056023 (-)
G1315518 NA other downstream 428486 61874995 ~ 62006707 (-)
G1315519 NA other downstream 510760 61865030 ~ 61891421 (-)
G1315509 NA other downstream 565975 61834626 ~ 61836573 (-)
G1316323 NA other upstream 131871 62534288 ~ 62537470 (-)
G1316451 NA other upstream 500442 62902859 ~ 62904682 (-)
G1316904 LOC106609576 other upstream 884090 63256527 ~ 63287904 (-)
G1318092 NA other upstream 1680620 64083037 ~ 64083888 (-)

Expression



Co-expression Network