G1316330


Basic Information

Item Value
gene id G1316330
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 62546863 ~ 62551018 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1501826
aaaggaggggggagagggagagaaagagagatggggagagacgaAGATAGAGACACAAATTGCAAAACACAATTATATAAAGACCAGAAAgagcacagagaaagagagagaacctcATTATTCCTGTAATGGGGCCCAGGGCATGATCTCTGACTGTCTCAGTAGTAATGGAGGGAGTAGGGCCACGTCTTTGACTGCCTCAGTAGCAATGGGGGGAGTAGGGcatgatctctgactgcctcagtagtaatggggggagcagggcatgatctctgactgcctcagTAGTAATGGGGGAGTAGGGCATCATCTCTGACTGCCTCAGTAGTAATGGAGGGAGTTCTTTGACTGCCTCAGTAGTAATGGGGGGAGTAGGGcatgatctctgactgcctcagAAGTAATGGGGGGAGTTCTTTCACTGCCTCAGTAGTAATGGGGAGGGAGCAGGGcatgatctctgactgcctcagTAGTAATGGGGGGAGTAGGGCATGAGGGGTAGTAGGGCATGCTCTCTGACTGCCTCAGTCGTAATGGGGAGGGAGCAGGGcatgatctctgactgcctcagAAGCAATGGGGGGAGTTGGGCATGTTCTCTGACTGCCTCAGTAGCAATGGGGGGAGTAGGGCATGAGGGGGAGCAGGGcatgatctctgactgcctcaCTAGTAATGGGGGGAACAGGAcatgatctctgactgcctcagAAGCAATGGGGTAAGTAGGGGATGTTCTCTGACTGCCTCAGTAGCAATGGGGGGAGTAGGGCATGAGGGGTAGAAGGCcatgatctctgactgcctcagTCGTAATGGGGGGAGTCGGGcatgatctctgactgcctcagTGGCAATGGGGAGGGAGCAGGAcatgatctctgactgcctcagtagcaatggggagggagcagggcatgatctctgactgcctcagTAGTAATGGAGAGGGAGCAGGTCATGATCTCGGACTGCCTCAGTAGTAATGGGGGGAGTAGGGCATGAGAGGTAGTAGGCCATCATCGCTGACTGCCTCAGTAGTAATGGGGAGGGAGCAGGGCATCATCTCTGACTGCCTCAGTAGCAATGGGGGGAGTTGGGCATGATCTCGGACTGCCTCAGTAGTAATGGGGGGAGTAGGGcatgatctctgactgcctcagTAGTAATGGGGGGAGTAGGGCATGAGGGGTAGTAGGCCCTAATCGGTGACTGCCTCAGTAGTAATGGGAAGGGAGTAGGGCATCATCTCTGACTGCTCAGTAGGAATGGGAAGGGAGTAGGTcatgatctctgactgcctcCGTAGCAATGGGGTGAGTCGGGcatgatctctgactgcctcagTGGCAATGGGGAAGTAGGGCATGATCTCTGACTGCCTGAGTAGCAATGGGGGGAGTAGGGcatgatctctgactgcctcagTGGCAATGGGGGGAGTAGGGCATGATCTCTGAGTGCCTCAGTAGCAATGGGGGGAGTAGGGcatgatctctgactgcctcCGTAGCAATGGGGGGAGTTGGGCATGATCTCGGACTGCCTCAGTAGTAATGGGGGGAGTAGGGcatgatctctgactgcctcagTAGTAATGGGGGGAGTAGGGCATGAGGGGTAGTAGGCCCTAATCGGTGACTGCCTCAGTAGTAATGGGAAGGGAGTAGGGCATCATCTCTGACTGCTCAGTAGGAATGGGAAGGGAGTAGGTcatgatctctgactgcctcCGTAGCAATGGGGTGAGTCGGGcatgatctctgactgcctcagTGGCAATGGGGAAGTAGGGcatgatctctgactgcctcagtagcaatggggggagtagggcatgatctctgactgcctcagTGGCAATGGGGGGAGTAGGGcatgatctctgactgcctcagtagcaatggggggagtagggcatgatctctgactgcctcCGTAGCAATGGGGGGAGTCGGGcatgatctctgactgcctcagTGGCAATGGGGGGAGTAGGGcatgatctctgactgcctcagtagcaatggggggagtagggcatgatctctgactgcctcCGTAGCAATGGGGTGAGTCGGGcatgatctctgactgcctcagtagtaatggggggagtagggcatgatctctgactgcctcagCAGCAATGGGGGGAGTAGGGCATGATCTCTGACTATCTCAGTAGTAATGGGGGGAGTAGGGCATGAGGGGTAGGAcatgatctctgactgcctcagtagcaatggggggagtagggcatgatctctgactgcctcagTGGCAATGGAGGGAGTAGGGCATGATCTCTGACTGCCTAAGTGGCAATGGGGGGAGTAGGGCATGATCTCTGACTGTCTCAGTAGTAATGGGGGGAGTAGGGCATGATCTCTGACTATCTCAGTAGTAATGGGGGGAGTAGGGcatgatctctgactgcctcagTAGCAATGGGGGGAGTAGGGCATGATCTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1501826 True 2480 lncRNA 0.55 4 62546863 62551018

Neighbor

gene id symbol gene type direction distance location
LOC110490564 LOC106609562 coding downstream 377528 62165720 ~ 62169335 (-)
LOC118938820 NA coding downstream 416398 62126538 ~ 62130465 (-)
LOC118938821 NA coding downstream 417198 62129476 ~ 62129665 (-)
LOC110490561 LOC106576375 coding downstream 463051 62080971 ~ 62083812 (-)
LOC110490558 NA coding downstream 484340 62058610 ~ 62062523 (-)
LOC110490568 LOC106609566 coding upstream 84620 62633205 ~ 62712367 (-)
LOC110490570 LOC106609586 coding upstream 178206 62729224 ~ 62740135 (-)
LOC110490571 LOC106596632 coding upstream 203938 62754956 ~ 62767499 (-)
LOC110490778 fut9 coding upstream 223678 62774696 ~ 62776771 (-)
LOC118938823 NA coding upstream 269068 62820086 ~ 62821153 (-)
G1316276 NA non-coding downstream 61464 62469883 ~ 62485399 (-)
G1316281 NA non-coding downstream 68824 62477345 ~ 62478039 (-)
G1316236 NA non-coding downstream 134080 62412215 ~ 62412783 (-)
G1316230 LOC100194703 non-coding downstream 144446 62402181 ~ 62402417 (-)
G1316217 NA non-coding downstream 184860 62358286 ~ 62362003 (-)
G1316332 NA non-coding upstream 6268 62557286 ~ 62562789 (-)
G1316310 NA non-coding upstream 36024 62587042 ~ 62605108 (-)
G1316409 NA non-coding upstream 194584 62745602 ~ 62746507 (-)
G1316414 NA non-coding upstream 200671 62751689 ~ 62752024 (-)
G1316323 NA other downstream 9393 62534288 ~ 62537470 (-)
G1316178 NA other downstream 282833 62257098 ~ 62264093 (-)
G1316051 LOC106609550 other downstream 490840 62042770 ~ 62056023 (-)
G1315518 NA other downstream 573168 61874995 ~ 62006707 (-)
G1315519 NA other downstream 655442 61865030 ~ 61891421 (-)
G1316451 NA other upstream 351841 62902859 ~ 62904682 (-)
G1316904 LOC106609576 other upstream 735489 63256527 ~ 63287904 (-)
G1318092 NA other upstream 1532019 64083037 ~ 64083888 (-)
G1318164 LOC106576481 other upstream 1665486 64216504 ~ 64227675 (-)

Expression


Co-expression Network