G1316310


Basic Information

Item Value
gene id G1316310
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 62587042 ~ 62605108 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1501803
ggatgagctgcactacctgagccacttgtgtgggttgtagactccgtctcatgctaccactagagtgaaagcaccgccagcattcaaaagtgaccaaaacatcagccaggaagcttaggaactgagaagtggtctgtggtccccacctgcagaaccactcctttattgggggtgtcttgctaattgcctataatttccacctgttgtctattccatttgcacaacagcatgtgcaatttattgtcaatcagtgttgcttcctaagtggacagtttgatttcacagaagtgtgattgacttggagttacattgtgttgtttaagtgttccctttatttttttgtgtgtgtgtgtgtgtgtacagatagTCCATGGGTCCAATGTTTGTGGTTTGTGGGAAGATATCCTCGTTTTGTAATCAACCTTAAACACCAAGTTCGTGAGAGTGTCCATGTTTGTAGTCCtttgacacagagacagaagggTCCACATTTGTAGTCCTTTTTGCATTGTGTGTGAGGGTCCATGTTTAAGGCTGGCTACATTCTTTGCATTCCACAGTAATAGACATGGGCGTCCGGCATTGCCTTGGTGTTCGCTCCTCTCTTGGCCTCCTGCCCTGGTTCCACTATCCACGGCACGTTGGCATGACCCTTCTGCTCCATCGACGGCTGCTCcatctgagagagggagaaggagtgagagtagggagagagagagagaggatggagagagag
>TU1501802
CCAATACAATCTCTAGAACCATAGATTTTATTTTCAACTCTGACCTTTCCATTTTGGTACCTTGTCTCCAGTGCGATGTGCGGCAAATATTTGATTCCtttatttttgtaaatgttttactACATTACATGTATGAACAATGAGCTGGCAAAATATCTATGTACATTTAGAGAGGACTATGTATTCATCCAAAGAATACAGAAATACTGTGGTAAAATATTCCATCTGCTTGGAGTTATGAGTCTAGCCCCATGAGAAACAGATTGGTGTGTTGACCGGacacaccaataataataatacaaataatagcTATTATTAATAATAAGGAGAGGAGCCATCTGAAATATTCACTCTCAGTATAGAACTATTATGCTATTTTTTAAAGGATGGCAATCATTCTCAAGCCCGGATTTTTTCATTTCAGCATATCATATAAAAATAATGTAACATTAAGAGTAGACAAGAATTGCACAAGAATAATCATAAGGTAAtctcatatgaaacatttaaaACGTCCGGCATTAATATGAATATTTCTTTAATTGGGATGGATGGTGTTTTGCTCAGGTAGGCGGAGCCATCCTTTGTGATGCCACTTGGCACAGGGCTCACCTGTTGCATGGTGGTCCGGCACGGCCAATTCTATCCATGTTATTGTAGTATTGACCGTGAAACAAAACTTAAACAAGAGGAAAAGAGCCAACCAGAAGTCCTTTACCTTGTCCCCATTCAAATACACACAGTTGTCCGTTACAGTCCAGACCTTGGGTGACCGTGGTATAGAGTTCAAAGGTCAAGGTCCAATTGAATGCAGAACAGGGGCTAGAGTTGTGGCTGCTTCAATGAAAGTCTACATTCACATATCTGACTGACATCTGTTACTAAGCAGTcccttaactgtgtgtgtgtgtgtgtgtgtgtacagatagTCCATGGGTCCAATGTTTGTGGTTTGTGGGAAGATATCCTCGTTTTGTAATCAACCTTAAACACCAAGTTCGTGAGAGTGTCCATGTTTGTAGTCCtttgacacagagacagaagggTCCACATTTGTAGTCCTTTTTGCATTGTGTGTGAGGGTCCATGTTTAAGGCTGGCTACATTCTTTGCATTCCACAGTAATAGACATGGGCGTCCGGCATTGCCCTGCGAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1501803 False 736 lncRNA 0.47 3 62587042 62605108
TU1501802 True 1159 lncRNA 0.39 2 62588391 62589580

Neighbor

gene id symbol gene type direction distance location
LOC110490564 LOC106609562 coding downstream 417707 62165720 ~ 62169335 (-)
LOC118938820 NA coding downstream 456577 62126538 ~ 62130465 (-)
LOC118938821 NA coding downstream 457377 62129476 ~ 62129665 (-)
LOC110490561 LOC106576375 coding downstream 503230 62080971 ~ 62083812 (-)
LOC110490558 NA coding downstream 524519 62058610 ~ 62062523 (-)
LOC110490568 LOC106609566 coding upstream 30530 62633205 ~ 62712367 (-)
LOC110490570 LOC106609586 coding upstream 124116 62729224 ~ 62740135 (-)
LOC110490571 LOC106596632 coding upstream 149848 62754956 ~ 62767499 (-)
LOC110490778 fut9 coding upstream 169588 62774696 ~ 62776771 (-)
LOC118938823 NA coding upstream 214978 62820086 ~ 62821153 (-)
G1316332 NA non-coding downstream 24253 62557286 ~ 62562789 (-)
G1316330 NA non-coding downstream 36024 62546863 ~ 62551018 (-)
G1316276 NA non-coding downstream 101643 62469883 ~ 62485399 (-)
G1316281 NA non-coding downstream 109003 62477345 ~ 62478039 (-)
G1316236 NA non-coding downstream 174259 62412215 ~ 62412783 (-)
G1316409 NA non-coding upstream 140494 62745602 ~ 62746507 (-)
G1316414 NA non-coding upstream 146581 62751689 ~ 62752024 (-)
G1316431 NA non-coding upstream 173041 62778149 ~ 62778350 (-)
G1316434 NA non-coding upstream 176036 62781144 ~ 62781591 (-)
G1316323 NA other downstream 49572 62534288 ~ 62537470 (-)
G1316178 NA other downstream 323012 62257098 ~ 62264093 (-)
G1316051 LOC106609550 other downstream 531019 62042770 ~ 62056023 (-)
G1315518 NA other downstream 613347 61874995 ~ 62006707 (-)
G1315519 NA other downstream 695621 61865030 ~ 61891421 (-)
G1316451 NA other upstream 297751 62902859 ~ 62904682 (-)
G1316904 LOC106609576 other upstream 681399 63256527 ~ 63287904 (-)
G1318092 NA other upstream 1477929 64083037 ~ 64083888 (-)
G1318164 LOC106576481 other upstream 1611396 64216504 ~ 64227675 (-)

Expression


Co-expression Network