G1316483



Basic Information


Item Value
gene id G1316483
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 62881842 ~ 62882265 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1502002
ATTATTTACATCTGGAGAGACTGATATGAGAAGTATTCTGGTCTTTACCTTTGATCTTGTGCCGCGTGCCAGTTTCTGTTCCAAAAACGAACAATGCGATCAAGAGATCAAGCTGTATTTTGTGCAGTTTGCTGCAGTCTTGCAGGGGGTGTGCCATTCAATTAGAATTAGAACAGGTTTTTGGCACAAGTGTACTCGCAGATTGTTTCTTAGTTAAATGTCTCCCTTGAAAAGTATGTTTTGAAGTTTGTTAGTGGAAAGAAATAATGGAAGTGGAAGAGTGGAAGTGGAagagtttatagaaatgtttgtgGTCAtacacacatccttaaaaacGTAGGTGCTGGGCTAAAGAATGAAACATGAAAAGAACAGAGGCCTGCATAATGAATATGCTCCCATTTTACCACCTTTTACTGGCAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1502002 True 424 lncRNA 0.39 1 62881842 62882265

Neighbor


gene id symbol gene type direction distance location
LOC110490574 LOC106609040 coding downstream 9092 62850140 ~ 62872750 (-)
si:ch211-244b2.4 LOC106576452 coding downstream 40168 62821255 ~ 62841674 (-)
LOC118938823 NA coding downstream 60689 62820086 ~ 62821153 (-)
LOC110490778 fut9 coding downstream 105071 62774696 ~ 62776771 (-)
LOC110490571 LOC106596632 coding downstream 115042 62754956 ~ 62767499 (-)
LOC110490577 lum coding upstream 4463 62886728 ~ 62890920 (-)
LOC118936239 LOC100301653 coding upstream 23699 62905964 ~ 62932588 (-)
LOC110490858 LOC106609036 coding upstream 98906 62981171 ~ 62985780 (-)
LOC110490579 LOC106576460 coding upstream 249085 63131350 ~ 63136329 (-)
LOC110490580 LOC106576502 coding upstream 351509 63233774 ~ 63254079 (-)
G1316442 NA non-coding downstream 90119 62791606 ~ 62791723 (-)
G1316436 NA non-coding downstream 98809 62782751 ~ 62783033 (-)
G1316435 NA non-coding downstream 99621 62781727 ~ 62782221 (-)
G1316434 NA non-coding downstream 100251 62781144 ~ 62781591 (-)
G1316431 NA non-coding downstream 103492 62778149 ~ 62778350 (-)
G1316504 NA non-coding upstream 57383 62939648 ~ 62939860 (-)
G1316509 LOC106562530 non-coding upstream 61900 62944165 ~ 62944562 (-)
G1316511 NA non-coding upstream 68376 62950641 ~ 62950909 (-)
G1316515 NA non-coding upstream 70815 62953080 ~ 62953343 (-)
G1316516 NA non-coding upstream 71400 62953665 ~ 62953991 (-)
G1316323 NA other downstream 344372 62534288 ~ 62537470 (-)
G1316178 NA other downstream 617812 62257098 ~ 62264093 (-)
G1316051 LOC106609550 other downstream 825819 62042770 ~ 62056023 (-)
G1315518 NA other downstream 908147 61874995 ~ 62006707 (-)
G1316451 NA other upstream 20594 62902859 ~ 62904682 (-)
G1316904 LOC106609576 other upstream 404242 63256527 ~ 63287904 (-)
G1318092 NA other upstream 1200772 64083037 ~ 64083888 (-)
G1318164 LOC106576481 other upstream 1334239 64216504 ~ 64227675 (-)
LOC110499867 LOC106576572 other upstream 1600562 64481916 ~ 64636502 (-)

Expression



Co-expression Network