G1316007 (LOC100301653)


Basic Information

Item Value
gene id G1316007
gene name LOC100301653
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 62921704 ~ 62932522 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1501457
CTATAGAACATTGGGCTTGTTAAACCGGGTTGAGTTCGAGACTTTCCCAAGCCCCGCTAACCTTTTATATCCCTGCGTCTGCAAAAACAATTAGGAAAATTAGAAAAAGGCCAAAATCCCGGCAAAACTATGTCATCGTCACGGAAGAGCATGAAATTCGCAGCATCTGAGAGTGTTTAAAGTGGTCAGACTGGGGCGATATTCTTTTATGCCAATTAACGAGCTGATGATGGGTAGATCAAACGCCAGACACTCTTTGAACATTTCTCTGAGGTCCCCAGATGGAGGGAACACCTCTTTGGGAACCAGGAAGATGTATCTTGTAAACTAAGGGACTGCCTCAGTtagacgagagagggagagaagagctgATGCAACAGGTTGTCTGTATTACACTGACAAATTGACCTCAGCTCATGAAAACACATTGAATCACAGAAGTACATACTGTTATGATATTAAATATAATTTATTGGGAGACTGTCTCACCTAAGTCGGAGCACTGCACCACGCGCAGGTGGCACTGGCAGCGGAAGGGGCACTTGGGTCCTTCGGGCATGGTGGGGATGTCCACGCTGGGCTCGATGGGCACCTCTGGCAAGCCAGAGCCCGCCTCATCCTCCATCATGAAGTCCAGGAAGCCCGACTGGCGGAAGGGAAGTGACCAGCACGCTGTGACCAGGAGCAGGGAGAGACAGGCTGACCTCATGGTGCCTTTGTCCTGGAGCCTGTGCTCTTTAGAAtcgtgggagagagagcgagagagttagAGTGCGCCGAGGTCAGATGGTCTTCCTTCCAAATATCCAGTTGGGGCTATAGGCTGAATCACTGTGAGCCTTCTGCACTGTGCTGCAAGGGGCTGAGCGATAATTGCACTGAGAGCGCGCGCAGCCAAGACCAAGCAGGTGTGCTCTGTCACGGCcgaaggggaggaggaaggagctgagagaggaagagagagagggagggagctcctGTTAAATTGAGACACTTGGTGGA

Function

NR:

description
decorin isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1501457 True 1002 TUCP 0.51 2 62921704 62932522

Neighbor

gene id symbol gene type direction distance location
LOC110490575 LOC106609039 coding upstream 71412 62844136 ~ 62850292 (+)
scyl2 scyl2 coding upstream 104870 62792914 ~ 62816834 (+)
depdc4 LOC106609043 coding upstream 128965 62786627 ~ 62792739 (+)
LOC110490567 anks1b coding upstream 331972 62231272 ~ 62589732 (+)
LOC118938822 NA coding upstream 363870 62556129 ~ 62557834 (+)
impdh1b LOC106576497 coding downstream 365826 63298348 ~ 63327816 (+)
LOC110490585 LOC106609575 coding downstream 450693 63383215 ~ 63407684 (+)
LOC110490586 LOC106609575 coding downstream 450844 63383366 ~ 63385748 (+)
LOC110490817 LOC106576481 coding downstream 1289562 64222084 ~ 64227831 (+)
pax4 LOC106576509 coding downstream 1473544 64406007 ~ 64408064 (+)
G1316009 NA non-coding upstream 9163 62909837 ~ 62912541 (+)
G1316023 NA non-coding upstream 21431 62898926 ~ 62900273 (+)
G1315936 NA non-coding upstream 33354 62886525 ~ 62888350 (+)
G1316016 NA non-coding upstream 37694 62883799 ~ 62884010 (+)
G1315950 NA non-coding upstream 46651 62872329 ~ 62875053 (+)
G1316039 NA non-coding downstream 21146 62953668 ~ 62953991 (+)
G1316040 NA non-coding downstream 21946 62954468 ~ 62954928 (+)
G1316043 NA non-coding downstream 29172 62961694 ~ 62961914 (+)
G1316048 NA non-coding downstream 35346 62967868 ~ 62968099 (+)
G1316544 NA non-coding downstream 83917 63016439 ~ 63018294 (+)
G1315860 NA other upstream 306517 62614795 ~ 62615187 (+)
G1315679 NA other upstream 657688 62257134 ~ 62264016 (+)
G1315616 NA other upstream 774544 62100972 ~ 62147160 (+)
LOC110490560 LOC106609558 other upstream 841044 62077976 ~ 62080953 (+)
G1317320 NA other downstream 881318 63813840 ~ 63814369 (+)
G1317674 LOC106613263 other downstream 1457084 64389606 ~ 64390097 (+)
G1317686 LOC106576509 other downstream 1474487 64407009 ~ 64410034 (+)
G1317968 NA other downstream 2227454 65159976 ~ 65179127 (+)

Expression


Co-expression Network