Gene
RNA
| Item | Value |
|---|---|
| gene id | G1316040 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 62954468 ~ 62954928 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1501490 | True | 461 | lncRNA | 0.41 | 1 | 62954468 | 62954928 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490575 | LOC106609039 | coding | upstream | 104176 | 62844136 ~ 62850292 (+) |
| scyl2 | scyl2 | coding | upstream | 137634 | 62792914 ~ 62816834 (+) |
| depdc4 | LOC106609043 | coding | upstream | 161729 | 62786627 ~ 62792739 (+) |
| LOC110490567 | anks1b | coding | upstream | 364736 | 62231272 ~ 62589732 (+) |
| impdh1b | LOC106576497 | coding | downstream | 343420 | 63298348 ~ 63327816 (+) |
| LOC110490585 | LOC106609575 | coding | downstream | 428287 | 63383215 ~ 63407684 (+) |
| LOC110490586 | LOC106609575 | coding | downstream | 428438 | 63383366 ~ 63385748 (+) |
| LOC110490817 | LOC106576481 | coding | downstream | 1267156 | 64222084 ~ 64227831 (+) |
| pax4 | LOC106576509 | coding | downstream | 1451138 | 64406007 ~ 64408064 (+) |
| G1316039 | NA | non-coding | upstream | 477 | 62953668 ~ 62953991 (+) |
| G1316009 | NA | non-coding | upstream | 41927 | 62909837 ~ 62912541 (+) |
| G1316023 | NA | non-coding | upstream | 54195 | 62898926 ~ 62900273 (+) |
| G1315936 | NA | non-coding | upstream | 66118 | 62886525 ~ 62888350 (+) |
| G1316016 | NA | non-coding | upstream | 70458 | 62883799 ~ 62884010 (+) |
| G1316043 | NA | non-coding | downstream | 6766 | 62961694 ~ 62961914 (+) |
| G1316048 | NA | non-coding | downstream | 12940 | 62967868 ~ 62968099 (+) |
| G1316544 | NA | non-coding | downstream | 61511 | 63016439 ~ 63018294 (+) |
| G1316575 | NA | non-coding | downstream | 118967 | 63073895 ~ 63074275 (+) |
| G1316576 | NA | non-coding | downstream | 120604 | 63075532 ~ 63075967 (+) |
| G1316007 | LOC100301653 | other | upstream | 21946 | 62921704 ~ 62932522 (+) |
| G1315860 | NA | other | upstream | 339281 | 62614795 ~ 62615187 (+) |
| G1315679 | NA | other | upstream | 690452 | 62257134 ~ 62264016 (+) |
| G1315616 | NA | other | upstream | 807308 | 62100972 ~ 62147160 (+) |
| G1317320 | NA | other | downstream | 858912 | 63813840 ~ 63814369 (+) |
| G1317674 | LOC106613263 | other | downstream | 1434678 | 64389606 ~ 64390097 (+) |
| G1317686 | LOC106576509 | other | downstream | 1452081 | 64407009 ~ 64410034 (+) |
| G1317968 | NA | other | downstream | 2205048 | 65159976 ~ 65179127 (+) |
