Gene
RNA
| Item | Value |
|---|---|
| gene id | G1316598 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 63118737 ~ 63119851 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1502139 | True | 221 | lncRNA | 0.42 | 2 | 63118737 | 63119851 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490575 | LOC106609039 | coding | upstream | 268445 | 62844136 ~ 62850292 (+) |
| scyl2 | scyl2 | coding | upstream | 301903 | 62792914 ~ 62816834 (+) |
| depdc4 | LOC106609043 | coding | upstream | 325998 | 62786627 ~ 62792739 (+) |
| LOC110490567 | anks1b | coding | upstream | 529005 | 62231272 ~ 62589732 (+) |
| impdh1b | LOC106576497 | coding | downstream | 178497 | 63298348 ~ 63327816 (+) |
| LOC110490585 | LOC106609575 | coding | downstream | 263364 | 63383215 ~ 63407684 (+) |
| LOC110490586 | LOC106609575 | coding | downstream | 263515 | 63383366 ~ 63385748 (+) |
| LOC110490817 | LOC106576481 | coding | downstream | 1102233 | 64222084 ~ 64227831 (+) |
| pax4 | LOC106576509 | coding | downstream | 1286215 | 64406007 ~ 64408064 (+) |
| G1316590 | NA | non-coding | upstream | 10213 | 63108291 ~ 63108524 (+) |
| G1316576 | NA | non-coding | upstream | 42770 | 63075532 ~ 63075967 (+) |
| G1316575 | NA | non-coding | upstream | 44462 | 63073895 ~ 63074275 (+) |
| G1316544 | NA | non-coding | upstream | 100443 | 63016439 ~ 63018294 (+) |
| G1316048 | NA | non-coding | upstream | 150638 | 62967868 ~ 62968099 (+) |
| G1316627 | NA | non-coding | downstream | 65395 | 63185246 ~ 63185482 (+) |
| G1316629 | NA | non-coding | downstream | 67913 | 63187764 ~ 63187987 (+) |
| G1316631 | NA | non-coding | downstream | 69641 | 63189492 ~ 63189705 (+) |
| G1316644 | NA | non-coding | downstream | 104942 | 63224793 ~ 63225047 (+) |
| G1316618 | NA | non-coding | downstream | 113426 | 63233277 ~ 63233678 (+) |
| G1316007 | LOC100301653 | other | upstream | 186215 | 62921704 ~ 62932522 (+) |
| G1315860 | NA | other | upstream | 503550 | 62614795 ~ 62615187 (+) |
| G1315679 | NA | other | upstream | 854721 | 62257134 ~ 62264016 (+) |
| G1315616 | NA | other | upstream | 971577 | 62100972 ~ 62147160 (+) |
| G1317320 | NA | other | downstream | 693989 | 63813840 ~ 63814369 (+) |
| G1317674 | LOC106613263 | other | downstream | 1269755 | 64389606 ~ 64390097 (+) |
| G1317686 | LOC106576509 | other | downstream | 1287158 | 64407009 ~ 64410034 (+) |
| G1317968 | NA | other | downstream | 2040125 | 65159976 ~ 65179127 (+) |
