Gene
RNA
| Item | Value |
|---|---|
| gene id | G1316904 |
| gene name | LOC106609576 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 63256527 ~ 63287904 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein EH28_17703 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1502499 | False | 594 | lncRNA | 0.38 | 2 | 63256527 | 63257141 |
| TU1502495 | True | 1222 | TUCP | 0.41 | 2 | 63286507 | 63287904 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490580 | LOC106576502 | coding | downstream | 2448 | 63233774 ~ 63254079 (-) |
| LOC110490579 | LOC106576460 | coding | downstream | 120198 | 63131350 ~ 63136329 (-) |
| LOC110490858 | LOC106609036 | coding | downstream | 270747 | 62981171 ~ 62985780 (-) |
| LOC118936239 | LOC100301653 | coding | downstream | 323939 | 62905964 ~ 62932588 (-) |
| LOC110490577 | lum | coding | downstream | 365607 | 62886728 ~ 62890920 (-) |
| LOC110490581 | NA | coding | upstream | 29226 | 63286367 ~ 63288128 (-) |
| LOC118938824 | NA | coding | upstream | 60619 | 63317760 ~ 63318286 (-) |
| prrt4 | LOC106576496 | coding | upstream | 70846 | 63327987 ~ 63366682 (-) |
| lepb | lepb1 | coding | upstream | 179299 | 63436440 ~ 63437537 (-) |
| LOC118938928 | NA | coding | upstream | 285550 | 63542691 ~ 63543117 (-) |
| G1316895 | NA | non-coding | downstream | 35990 | 63218409 ~ 63220537 (-) |
| G1316853 | NA | non-coding | downstream | 56548 | 63199653 ~ 63199979 (-) |
| G1316874 | NA | non-coding | downstream | 66485 | 63189838 ~ 63190042 (-) |
| G1316872 | NA | non-coding | downstream | 67568 | 63188746 ~ 63188959 (-) |
| G1316834 | NA | non-coding | downstream | 152142 | 63103339 ~ 63104385 (-) |
| G1316922 | NA | non-coding | upstream | 47883 | 63305024 ~ 63305283 (-) |
| G1316926 | imdh1 | non-coding | upstream | 57101 | 63314242 ~ 63316299 (-) |
| G1316928 | NA | non-coding | upstream | 64493 | 63321634 ~ 63322000 (-) |
| G1316929 | NA | non-coding | upstream | 65790 | 63322931 ~ 63324136 (-) |
| G1316925 | NA | non-coding | upstream | 68595 | 63325736 ~ 63327807 (-) |
| G1316451 | NA | other | downstream | 351845 | 62902859 ~ 62904682 (-) |
| LOC110490571 | LOC106596632 | other | downstream | 489028 | 62754956 ~ 62767499 (-) |
| G1316323 | NA | other | downstream | 719057 | 62534288 ~ 62537470 (-) |
| G1316178 | NA | other | downstream | 992497 | 62257098 ~ 62264093 (-) |
| G1316051 | LOC106609550 | other | downstream | 1200504 | 62042770 ~ 62056023 (-) |
| G1316904 | LOC106609576 | other | upstream | 29366 | 63256527 ~ 63287904 (-) |
| G1318092 | NA | other | upstream | 825896 | 64083037 ~ 64083888 (-) |
| G1318164 | LOC106576481 | other | upstream | 959363 | 64216504 ~ 64227675 (-) |
| LOC110499867 | LOC106576572 | other | upstream | 1225686 | 64481916 ~ 64636502 (-) |
| G1318477 | NA | other | upstream | 1811136 | 65068277 ~ 65153287 (-) |
| LOC110490779 | LOC106609576 | coding | downstream | 4111 | 63256438 ~ 63282396 (-) |
| LOC110490780 | snd1 | coding | upstream | 730909 | 64018813 ~ 64387969 (-) |
| G1318935 | NA | other | upstream | 2182063 | 65469967 ~ 65473164 (-) |
