Gene
RNA
| Item | Value |
|---|---|
| gene id | G1317024 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 63481788 ~ 63482023 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1502625 | True | 236 | lncRNA | 0.38 | 1 | 63481788 | 63482023 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490585 | LOC106609575 | coding | upstream | 74104 | 63383215 ~ 63407684 (+) |
| LOC110490586 | LOC106609575 | coding | upstream | 96040 | 63383366 ~ 63385748 (+) |
| impdh1b | LOC106576497 | coding | upstream | 153972 | 63298348 ~ 63327816 (+) |
| LOC110490575 | LOC106609039 | coding | upstream | 631496 | 62844136 ~ 62850292 (+) |
| scyl2 | scyl2 | coding | upstream | 664954 | 62792914 ~ 62816834 (+) |
| LOC110490817 | LOC106576481 | coding | downstream | 740061 | 64222084 ~ 64227831 (+) |
| pax4 | LOC106576509 | coding | downstream | 924043 | 64406007 ~ 64408064 (+) |
| LOC118938929 | LOC106576509 | coding | downstream | 926890 | 64408913 ~ 64410363 (+) |
| LOC110499870 | NA | coding | downstream | 1062112 | 64544135 ~ 64552715 (+) |
| LOC110510792 | wnt5b | coding | downstream | 1220758 | 64702781 ~ 64824029 (+) |
| G1317014 | NA | non-coding | upstream | 9683 | 63471767 ~ 63472105 (+) |
| G1317006 | NA | non-coding | upstream | 17885 | 63463660 ~ 63463903 (+) |
| G1316721 | NA | non-coding | upstream | 73348 | 63386020 ~ 63408440 (+) |
| G1316717 | NA | non-coding | upstream | 105217 | 63376361 ~ 63376571 (+) |
| G1316709 | NA | non-coding | upstream | 117265 | 63364240 ~ 63364523 (+) |
| G1317027 | NA | non-coding | downstream | 1050 | 63483073 ~ 63483354 (+) |
| G1317046 | NA | non-coding | downstream | 16138 | 63498161 ~ 63498537 (+) |
| G1317055 | NA | non-coding | downstream | 17842 | 63499865 ~ 63500185 (+) |
| G1317105 | NA | non-coding | downstream | 86269 | 63568292 ~ 63596942 (+) |
| G1317133 | NA | non-coding | downstream | 142208 | 63624231 ~ 63624523 (+) |
| G1316007 | LOC100301653 | other | upstream | 549266 | 62921704 ~ 62932522 (+) |
| G1315860 | NA | other | upstream | 866601 | 62614795 ~ 62615187 (+) |
| LOC110490567 | anks1b | other | upstream | 1006274 | 62231272 ~ 62589732 (+) |
| G1315679 | NA | other | upstream | 1217772 | 62257134 ~ 62264016 (+) |
| G1317320 | NA | other | downstream | 331817 | 63813840 ~ 63814369 (+) |
| G1317674 | LOC106613263 | other | downstream | 907583 | 64389606 ~ 64390097 (+) |
| G1317686 | LOC106576509 | other | downstream | 924986 | 64407009 ~ 64410034 (+) |
| G1317968 | NA | other | downstream | 1677953 | 65159976 ~ 65179127 (+) |
| LOC110518394 | LOC107732972 | other | downstream | 1809779 | 65291802 ~ 65866042 (+) |
