G1317027


Basic Information

Item Value
gene id G1317027
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 63483073 ~ 63483354 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1502628
gatggtacactgtggtatttcacccagtagatatgggagtttataaaaattgggtttgtttgcgattctttgtggatctgtgtaatctgagggaaatacatgtttctaatatggtcatacattgggcaggaggttaggaagtacagttcagtttccacctcattttgtgggcagtgagcacactgagcgccaggtctgcctacggcggcctttctcaatagcaaggctatgctcactgagtctgtacatagtcaaagctgtccttaagtttgggtcagtcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1502628 True 282 lncRNA 0.45 1 63483073 63483354

Neighbor

gene id symbol gene type direction distance location
LOC110490585 LOC106609575 coding upstream 75389 63383215 ~ 63407684 (+)
LOC110490586 LOC106609575 coding upstream 97325 63383366 ~ 63385748 (+)
impdh1b LOC106576497 coding upstream 155257 63298348 ~ 63327816 (+)
LOC110490575 LOC106609039 coding upstream 632781 62844136 ~ 62850292 (+)
scyl2 scyl2 coding upstream 666239 62792914 ~ 62816834 (+)
LOC110490817 LOC106576481 coding downstream 738730 64222084 ~ 64227831 (+)
pax4 LOC106576509 coding downstream 922712 64406007 ~ 64408064 (+)
LOC118938929 LOC106576509 coding downstream 925559 64408913 ~ 64410363 (+)
LOC110499870 NA coding downstream 1060781 64544135 ~ 64552715 (+)
LOC110510792 wnt5b coding downstream 1219427 64702781 ~ 64824029 (+)
G1317024 NA non-coding upstream 1050 63481788 ~ 63482023 (+)
G1317014 NA non-coding upstream 10968 63471767 ~ 63472105 (+)
G1317006 NA non-coding upstream 19170 63463660 ~ 63463903 (+)
G1316721 NA non-coding upstream 74633 63386020 ~ 63408440 (+)
G1316717 NA non-coding upstream 106502 63376361 ~ 63376571 (+)
G1317046 NA non-coding downstream 14807 63498161 ~ 63498537 (+)
G1317055 NA non-coding downstream 16511 63499865 ~ 63500185 (+)
G1317105 NA non-coding downstream 84938 63568292 ~ 63596942 (+)
G1317133 NA non-coding downstream 140877 63624231 ~ 63624523 (+)
G1317134 NA non-coding downstream 142777 63626131 ~ 63626470 (+)
G1316007 LOC100301653 other upstream 550551 62921704 ~ 62932522 (+)
G1315860 NA other upstream 867886 62614795 ~ 62615187 (+)
LOC110490567 anks1b other upstream 1007559 62231272 ~ 62589732 (+)
G1315679 NA other upstream 1219057 62257134 ~ 62264016 (+)
G1317320 NA other downstream 330486 63813840 ~ 63814369 (+)
G1317674 LOC106613263 other downstream 906252 64389606 ~ 64390097 (+)
G1317686 LOC106576509 other downstream 923655 64407009 ~ 64410034 (+)
G1317968 NA other downstream 1676622 65159976 ~ 65179127 (+)
LOC110518394 LOC107732972 other downstream 1808448 65291802 ~ 65866042 (+)

Expression


Co-expression Network