G1317046


Basic Information

Item Value
gene id G1317046
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 63498161 ~ 63498537 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1502647
AGAGAACAGGCACAGAGAGATCCTGAGAGTGACACACAGGGAACTGTAGAGGACGGTGGGGCAGTAAAAGGACCCCAGGCTGAAAGAAGGGAACGTGTTGATGAAGGTGCTGCTATAGCAGAAGCTATAATGGAACAAGCACACACTGAGGATGTTCAAGGGCCTCCAGACAATCCGATGTGTTAGCAGCAAATGCTGCCGTTAACAGTTCCCATGTGATGTTTTACCTGACTGTCTGTACTGTATATTCAAGGGCGTATTGAAagctttttaaacatttttaaccAGGCACAGTTCAAAGCATGTGAGTGAAATTATAATCTTCACTTAAAGTCCCTGATCTCTTGTTTTTAAATTCAAGTAGCCCCCTAGTGTAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1502647 True 377 lncRNA 0.44 1 63498161 63498537

Neighbor

gene id symbol gene type direction distance location
LOC110490585 LOC106609575 coding upstream 90477 63383215 ~ 63407684 (+)
LOC110490586 LOC106609575 coding upstream 112413 63383366 ~ 63385748 (+)
impdh1b LOC106576497 coding upstream 170345 63298348 ~ 63327816 (+)
LOC110490575 LOC106609039 coding upstream 647869 62844136 ~ 62850292 (+)
scyl2 scyl2 coding upstream 681327 62792914 ~ 62816834 (+)
LOC110490817 LOC106576481 coding downstream 723547 64222084 ~ 64227831 (+)
pax4 LOC106576509 coding downstream 907529 64406007 ~ 64408064 (+)
LOC118938929 LOC106576509 coding downstream 910376 64408913 ~ 64410363 (+)
LOC110499870 NA coding downstream 1045598 64544135 ~ 64552715 (+)
LOC110510792 wnt5b coding downstream 1204244 64702781 ~ 64824029 (+)
G1317027 NA non-coding upstream 14807 63483073 ~ 63483354 (+)
G1317024 NA non-coding upstream 16138 63481788 ~ 63482023 (+)
G1317014 NA non-coding upstream 26056 63471767 ~ 63472105 (+)
G1317006 NA non-coding upstream 34258 63463660 ~ 63463903 (+)
G1316721 NA non-coding upstream 89721 63386020 ~ 63408440 (+)
G1317055 NA non-coding downstream 1328 63499865 ~ 63500185 (+)
G1317105 NA non-coding downstream 69755 63568292 ~ 63596942 (+)
G1317133 NA non-coding downstream 125694 63624231 ~ 63624523 (+)
G1317134 NA non-coding downstream 127594 63626131 ~ 63626470 (+)
G1317140 NA non-coding downstream 133883 63632420 ~ 63632717 (+)
G1316007 LOC100301653 other upstream 565639 62921704 ~ 62932522 (+)
G1315860 NA other upstream 882974 62614795 ~ 62615187 (+)
LOC110490567 anks1b other upstream 1022647 62231272 ~ 62589732 (+)
G1315679 NA other upstream 1234145 62257134 ~ 62264016 (+)
G1317320 NA other downstream 315303 63813840 ~ 63814369 (+)
G1317674 LOC106613263 other downstream 891069 64389606 ~ 64390097 (+)
G1317686 LOC106576509 other downstream 908472 64407009 ~ 64410034 (+)
G1317968 NA other downstream 1661439 65159976 ~ 65179127 (+)
LOC110518394 LOC107732972 other downstream 1793265 65291802 ~ 65866042 (+)

Expression


Co-expression Network