Gene
RNA
| Item | Value |
|---|---|
| gene id | G1317061 |
| gene name | LOC101065034 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 63507278 ~ 63507530 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: piggyBac transposable element-derived protein 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1502663 | True | 253 | lncRNA | 0.43 | 1 | 63507278 | 63507530 |
63,504,000
63,504,400
63,504,800
63,505,200
63,505,600
63,506,000
63,506,400
63,506,800
63,507,200
63,507,600
63,508,000
63,508,400
NC_048579.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lepb | lepb1 | coding | downstream | 69741 | 63436440 ~ 63437537 (-) |
| prrt4 | LOC106576496 | coding | downstream | 140596 | 63327987 ~ 63366682 (-) |
| LOC118938824 | NA | coding | downstream | 188992 | 63317760 ~ 63318286 (-) |
| LOC110490581 | NA | coding | downstream | 219150 | 63286367 ~ 63288128 (-) |
| LOC110490779 | LOC106609576 | coding | downstream | 224882 | 63256438 ~ 63282396 (-) |
| LOC118938928 | NA | coding | upstream | 35161 | 63542691 ~ 63543117 (-) |
| LOC110490780 | snd1 | coding | upstream | 511283 | 64018813 ~ 64387969 (-) |
| hgfa | LOC105020379 | coding | upstream | 904515 | 64412045 ~ 64457130 (-) |
| LOC110499867 | LOC106576572 | coding | upstream | 974386 | 64481916 ~ 64636502 (-) |
| LOC110517721 | LOC106590767 | coding | upstream | 1198567 | 64706097 ~ 64709084 (-) |
| G1317044 | NA | non-coding | downstream | 15547 | 63491507 ~ 63491731 (-) |
| G1317013 | NA | non-coding | downstream | 37450 | 63469535 ~ 63469828 (-) |
| G1317008 | NA | non-coding | downstream | 42576 | 63464169 ~ 63464702 (-) |
| G1316999 | NA | non-coding | downstream | 52947 | 63451159 ~ 63454331 (-) |
| G1316958 | NA | non-coding | downstream | 136979 | 63369982 ~ 63370299 (-) |
| G1317073 | NA | non-coding | upstream | 7445 | 63514975 ~ 63515182 (-) |
| G1317075 | NA | non-coding | upstream | 8955 | 63516485 ~ 63516711 (-) |
| G1317113 | NA | non-coding | upstream | 28998 | 63536528 ~ 63587179 (-) |
| G1317119 | NA | non-coding | upstream | 42549 | 63550079 ~ 63578808 (-) |
| G1317118 | NA | non-coding | upstream | 77072 | 63584602 ~ 63619296 (-) |
| G1316904 | LOC106609576 | other | downstream | 219374 | 63256527 ~ 63287904 (-) |
| G1316451 | NA | other | downstream | 602596 | 62902859 ~ 62904682 (-) |
| LOC110490571 | LOC106596632 | other | downstream | 739779 | 62754956 ~ 62767499 (-) |
| G1316323 | NA | other | downstream | 969808 | 62534288 ~ 62537470 (-) |
| G1316178 | NA | other | downstream | 1243248 | 62257098 ~ 62264093 (-) |
| G1318092 | NA | other | upstream | 575507 | 64083037 ~ 64083888 (-) |
| G1318164 | LOC106576481 | other | upstream | 708974 | 64216504 ~ 64227675 (-) |
| G1318477 | NA | other | upstream | 1560747 | 65068277 ~ 65153287 (-) |
| G1318935 | NA | other | upstream | 1962437 | 65469967 ~ 65473164 (-) |
