G1317133


Basic Information

Item Value
gene id G1317133
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 63624231 ~ 63624523 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1502750
ctgcaaacgtaccgggccccccttcagcagtgaggtaatgggagcggctacctgaccaaaaccccggataaacctccggtagtagttggcaaaccctagaaaccgctgcacctcctttaccgtggtgagagtcggccaattacgcacggctgagaTGCGGTCActctaggaaggagacggactgttgaaaTAACAGATATTTCTCAGCCTTggtgtacaggtcatgctccaacagttgaCCAAGCACCTTAaacaccagggacacatgcttggcgcgtgtagcggagtatatc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106581772, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1502750 True 293 lncRNA 0.54 1 63624231 63624523

Neighbor

gene id symbol gene type direction distance location
LOC110490585 LOC106609575 coding upstream 216547 63383215 ~ 63407684 (+)
LOC110490586 LOC106609575 coding upstream 238483 63383366 ~ 63385748 (+)
impdh1b LOC106576497 coding upstream 296415 63298348 ~ 63327816 (+)
LOC110490575 LOC106609039 coding upstream 773939 62844136 ~ 62850292 (+)
scyl2 scyl2 coding upstream 807397 62792914 ~ 62816834 (+)
LOC110490817 LOC106576481 coding downstream 597561 64222084 ~ 64227831 (+)
pax4 LOC106576509 coding downstream 781543 64406007 ~ 64408064 (+)
LOC118938929 LOC106576509 coding downstream 784390 64408913 ~ 64410363 (+)
LOC110499870 NA coding downstream 919612 64544135 ~ 64552715 (+)
LOC110510792 wnt5b coding downstream 1078258 64702781 ~ 64824029 (+)
G1317105 NA non-coding upstream 27289 63568292 ~ 63596942 (+)
G1317055 NA non-coding upstream 124046 63499865 ~ 63500185 (+)
G1317046 NA non-coding upstream 125694 63498161 ~ 63498537 (+)
G1317027 NA non-coding upstream 140877 63483073 ~ 63483354 (+)
G1317024 NA non-coding upstream 142208 63481788 ~ 63482023 (+)
G1317134 NA non-coding downstream 1608 63626131 ~ 63626470 (+)
G1317140 NA non-coding downstream 7897 63632420 ~ 63632717 (+)
G1317182 NA non-coding downstream 82966 63707489 ~ 63707732 (+)
G1317184 NA non-coding downstream 86111 63710634 ~ 63710841 (+)
G1317187 NA non-coding downstream 90894 63715417 ~ 63715647 (+)
G1316007 LOC100301653 other upstream 691709 62921704 ~ 62932522 (+)
G1315860 NA other upstream 1009044 62614795 ~ 62615187 (+)
LOC110490567 anks1b other upstream 1148717 62231272 ~ 62589732 (+)
G1315679 NA other upstream 1360215 62257134 ~ 62264016 (+)
G1317320 NA other downstream 189317 63813840 ~ 63814369 (+)
G1317674 LOC106613263 other downstream 765083 64389606 ~ 64390097 (+)
G1317686 LOC106576509 other downstream 782486 64407009 ~ 64410034 (+)
G1317968 NA other downstream 1535453 65159976 ~ 65179127 (+)
LOC110518394 LOC107732972 other downstream 1667279 65291802 ~ 65866042 (+)

Expression


Co-expression Network