Gene
RNA
| Item | Value |
|---|---|
| gene id | G1317187 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 63715417 ~ 63715647 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1502810 | True | 231 | lncRNA | 0.39 | 1 | 63715417 | 63715647 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490585 | LOC106609575 | coding | upstream | 307733 | 63383215 ~ 63407684 (+) |
| LOC110490586 | LOC106609575 | coding | upstream | 329669 | 63383366 ~ 63385748 (+) |
| impdh1b | LOC106576497 | coding | upstream | 387601 | 63298348 ~ 63327816 (+) |
| LOC110490575 | LOC106609039 | coding | upstream | 865125 | 62844136 ~ 62850292 (+) |
| scyl2 | scyl2 | coding | upstream | 898583 | 62792914 ~ 62816834 (+) |
| LOC110490817 | LOC106576481 | coding | downstream | 506437 | 64222084 ~ 64227831 (+) |
| pax4 | LOC106576509 | coding | downstream | 690419 | 64406007 ~ 64408064 (+) |
| LOC118938929 | LOC106576509 | coding | downstream | 693266 | 64408913 ~ 64410363 (+) |
| LOC110499870 | NA | coding | downstream | 828488 | 64544135 ~ 64552715 (+) |
| LOC110510792 | wnt5b | coding | downstream | 987134 | 64702781 ~ 64824029 (+) |
| G1317184 | NA | non-coding | upstream | 4576 | 63710634 ~ 63710841 (+) |
| G1317182 | NA | non-coding | upstream | 7685 | 63707489 ~ 63707732 (+) |
| G1317140 | NA | non-coding | upstream | 82700 | 63632420 ~ 63632717 (+) |
| G1317134 | NA | non-coding | upstream | 88947 | 63626131 ~ 63626470 (+) |
| G1317133 | NA | non-coding | upstream | 90894 | 63624231 ~ 63624523 (+) |
| G1317179 | NA | non-coding | downstream | 26519 | 63742166 ~ 63748082 (+) |
| G1317325 | NA | non-coding | downstream | 109044 | 63824691 ~ 63824929 (+) |
| G1317358 | NA | non-coding | downstream | 165409 | 63881056 ~ 63881311 (+) |
| G1317436 | NA | non-coding | downstream | 282016 | 63997663 ~ 64020208 (+) |
| G1317447 | NA | non-coding | downstream | 283331 | 63998978 ~ 64005213 (+) |
| G1316007 | LOC100301653 | other | upstream | 782895 | 62921704 ~ 62932522 (+) |
| G1315860 | NA | other | upstream | 1100230 | 62614795 ~ 62615187 (+) |
| LOC110490567 | anks1b | other | upstream | 1239903 | 62231272 ~ 62589732 (+) |
| G1315679 | NA | other | upstream | 1451401 | 62257134 ~ 62264016 (+) |
| G1317320 | NA | other | downstream | 98193 | 63813840 ~ 63814369 (+) |
| G1317674 | LOC106613263 | other | downstream | 673959 | 64389606 ~ 64390097 (+) |
| G1317686 | LOC106576509 | other | downstream | 691362 | 64407009 ~ 64410034 (+) |
| G1317968 | NA | other | downstream | 1444329 | 65159976 ~ 65179127 (+) |
| LOC110518394 | LOC107732972 | other | downstream | 1576155 | 65291802 ~ 65866042 (+) |
