G1318164 (LOC106576481)


Basic Information

Item Value
gene id G1318164
gene name LOC106576481
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 64216504 ~ 64227675 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1504007
TTCACTGCATTCTCTGTAGCATTGGTTTTTTTAAAAAATCACACAGAAtgcctcttttttttttattttaacaagTCTACCCTCATTTCTCAAAGTCAAGACAGTATGTTAAACAACTCGTCTTTTTAAATAGAAGTTACAAGTTAGAAAATAGtttcaatgtatttatttttaatataatATGCTTCTCTATCACCAGTCCATGGTACTTTCAATAGTTTCATATATAGATTTATTTATAAGCATGTACAACAAGAAATGTTCAGTCTTTAAGTTTTGCACTCTGTACAAAAAAGAAAGTTCCTGTCTTTTCCCCCGTTGTGCATTCTATTGCATGTAGTTATGAGAAGAGAGGGGTGGCTATGGGGATTGGGACTTGcctggggggtgggtggggggttgTGTGGGGGGCTTTAAATCTGAGTCTCCTGAACCTTCTCCTTGGTGTGAGTTTTTATGACAAAGGGCTCAGGGAGGTTTGTGATGGCGCTGGGCAAGGTTCGAGGGAGAGAGTTCCCAATGTTGTTCTCTGTCCATTTAGCCCCATGTCCTGCTGGCTTGTACGTGTTGTATTTGGGCTTGAGGGTGCGGTAGTCCACCTTGTGATGGTCTGCTTTGTGGGGACTGGAATCCATTTTGGGTTTCTGGTTGCCATAATCCTGTTTGTGGGGGCTGTTGTAGCCTGATTTGAAGACGATGTAGTCCGGCGCGCCCTTGGGGGTGTGTTCTGATTTGGGTTTGTATTGACTGTTGTCGGGTTTGGATTTGTGTGTACTGTACTCCGGTTTGGATTTGGACTGAGTGCTGTAGTCAGGTTTGTAAGGGCTGTAGTCTGGTTTAGGTCGTGGGTGAGTGCTGTAGTCAGGTTTGAATGGGCTATAGTCCGGTTTGGGTTTTGGATGAGTGCCATAATCCGGTTTGAAGGGGCTATAATCTGCTTTAGGTGTTCTCGGGTGAGTACTACTGCTATAATCCGGTTTGAATGGGCTATAATCTGCTTTAGGTGTTCTCGGGTGAGTACTGTAGTCAGGTTTGAAGGGGCTATAGTCTGCTTTAGGCTGCTTGTGAGTGCTATATTCCGGTCTGAACGGGCTATAGTCAGCCTTTGGTCTATGAAGGCTAAAATCTGGTGTAGATTTGTGGGTGCTATATTCCACTGTAGAtttgtgggtagtgtagtccaCGGTTGGTTTGTAGGTGGTGTACTCAGCCTTGGGCTTGTGTATAATGTAGTCTGGTTTGGGCATGTGGATTGTGTAGTCCCCCTTGTAGTCGGCTTTGGGTTTGGGGAAGCCATAGTCTGTTTTGTGGCTGATATAATCCAGTTTTTGGATGCTGTTGTGGTCTCGGATCTGGTTGGCAcacacacacacact

Function

NR:

description
leucine-rich repeat-containing protein 4-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1504007 True 1376 TUCP 0.44 2 64216504 64227675

Neighbor

gene id symbol gene type direction distance location
LOC118938928 NA coding downstream 673387 63542691 ~ 63543117 (-)
lepb lepb1 coding downstream 778967 63436440 ~ 63437537 (-)
prrt4 LOC106576496 coding downstream 849822 63327987 ~ 63366682 (-)
LOC118938824 NA coding downstream 898218 63317760 ~ 63318286 (-)
LOC110490581 NA coding downstream 928376 63286367 ~ 63288128 (-)
hgfa LOC105020379 coding upstream 184370 64412045 ~ 64457130 (-)
LOC110499867 LOC106576572 coding upstream 254241 64481916 ~ 64636502 (-)
LOC110517721 LOC106590767 coding upstream 478422 64706097 ~ 64709084 (-)
LOC110513474 NA coding upstream 714743 64942418 ~ 64946166 (-)
LOC110511498 NA coding upstream 732503 64960178 ~ 64998613 (-)
G1318116 NA non-coding downstream 73737 64138933 ~ 64142767 (-)
G1318112 NA non-coding downstream 86400 64127108 ~ 64130104 (-)
G1317369 NA non-coding downstream 324028 63892263 ~ 63892476 (-)
G1317342 NA non-coding downstream 373685 63842519 ~ 63842819 (-)
G1317316 NA non-coding downstream 410922 63805336 ~ 63805582 (-)
G1318169 NA non-coding upstream 5225 64232900 ~ 64234010 (-)
G1318170 NA non-coding upstream 9256 64236931 ~ 64237379 (-)
G1318171 NA non-coding upstream 9551 64237226 ~ 64237946 (-)
G1318246 NA non-coding upstream 162787 64390462 ~ 64390747 (-)
G1318247 NA non-coding upstream 167814 64395489 ~ 64395694 (-)
G1318092 NA other downstream 132616 64083037 ~ 64083888 (-)
G1316904 LOC106609576 other downstream 928600 63256527 ~ 63287904 (-)
G1316451 NA other downstream 1311822 62902859 ~ 62904682 (-)
LOC110490571 LOC106596632 other downstream 1449005 62754956 ~ 62767499 (-)
G1316323 NA other downstream 1679034 62534288 ~ 62537470 (-)
G1318477 NA other upstream 840602 65068277 ~ 65153287 (-)
G1318935 NA other upstream 1242292 65469967 ~ 65473164 (-)
G1319357 LOC106593594 other upstream 2051370 66279045 ~ 66282108 (-)
LOC110490781 LOC106576552 other upstream 2580772 66808409 ~ 66920061 (-)

Expression


Co-expression Network