Gene
RNA
| Item | Value |
|---|---|
| gene id | G1318457 |
| gene name | LOC106576469 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 64938188 ~ 64955088 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: mediator of DNA damage checkpoint protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1504356 | True | 316 | lncRNA | 0.57 | 2 | 64938188 | 64955088 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517721 | LOC106590767 | coding | downstream | 229104 | 64706097 ~ 64709084 (-) |
| LOC110499867 | LOC106576572 | coding | downstream | 301686 | 64481916 ~ 64636502 (-) |
| hgfa | LOC105020379 | coding | downstream | 481058 | 64412045 ~ 64457130 (-) |
| LOC110490780 | snd1 | coding | downstream | 550219 | 64018813 ~ 64387969 (-) |
| LOC118938928 | NA | coding | downstream | 1395071 | 63542691 ~ 63543117 (-) |
| LOC110511498 | NA | coding | upstream | 5090 | 64960178 ~ 64998613 (-) |
| LOC110517607 | NA | coding | upstream | 7454 | 64962542 ~ 64965810 (-) |
| LOC118938826 | NA | coding | upstream | 40884 | 64995972 ~ 65014411 (-) |
| LOC110510812 | NA | coding | upstream | 42869 | 64997957 ~ 65000979 (-) |
| LOC118938827 | LOC106576471 | coding | upstream | 66317 | 65021405 ~ 65058643 (-) |
| G1318450 | NA | non-coding | downstream | 7239 | 64930543 ~ 64930949 (-) |
| G1318448 | NA | non-coding | downstream | 8595 | 64927343 ~ 64929593 (-) |
| G1318445 | LOC106576468 | non-coding | downstream | 16762 | 64919470 ~ 64921426 (-) |
| G1318438 | NA | non-coding | downstream | 31166 | 64904556 ~ 64907022 (-) |
| G1318427 | NA | non-coding | downstream | 67414 | 64870478 ~ 64870774 (-) |
| G1318465 | LOC106576470 | non-coding | upstream | 35703 | 64990791 ~ 65006415 (-) |
| G1318488 | NA | non-coding | upstream | 129008 | 65084096 ~ 65084339 (-) |
| G1318491 | NA | non-coding | upstream | 135044 | 65090132 ~ 65091285 (-) |
| G1318498 | NA | non-coding | upstream | 144443 | 65099531 ~ 65103149 (-) |
| G1318164 | LOC106576481 | other | downstream | 710513 | 64216504 ~ 64227675 (-) |
| G1318092 | NA | other | downstream | 854300 | 64083037 ~ 64083888 (-) |
| G1316904 | LOC106609576 | other | downstream | 1650284 | 63256527 ~ 63287904 (-) |
| G1316451 | NA | other | downstream | 2033506 | 62902859 ~ 62904682 (-) |
| G1318477 | NA | other | upstream | 113189 | 65068277 ~ 65153287 (-) |
| G1318935 | NA | other | upstream | 514879 | 65469967 ~ 65473164 (-) |
| G1319357 | LOC106593594 | other | upstream | 1323957 | 66279045 ~ 66282108 (-) |
| LOC110490781 | LOC106576552 | other | upstream | 1853359 | 66808409 ~ 66920061 (-) |
| G1319781 | LOC106576551 | other | upstream | 1901091 | 66856179 ~ 66862281 (-) |
