G1318465 (LOC106576470)


Basic Information

Item Value
gene id G1318465
gene name LOC106576470
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 64990791 ~ 65006415 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1504395
ctgtctctctgtgtgtgtcctgttcTTCGCTGTCAGGGACAAAGGGGGGTTGTTGTGGATATTGAGGGGGGTGGAGTTAGTAGTCTTTTGGCAGCATGACCCTGCGACCCCCCATGAAATAACACAAGGTGATCTTCCTTCTGAAAGGAATGTTGTCCAGGTCCTCCACTGCCACCCTCTTGTTGCCCCTGACGCTGCTCTCCTCCTGGTCGTACATGGGGCACATGTAGGCTGTTCGCCTCAGGGCGTAGATGTCCACCTCGTCCTCGTCGTCCCACGGCTGGTAGGGCTGCTGGGAGGGAACGGCTGACTTGACCAGACGGGGTCTCATCATGGCCAGCTCTAGGTCACGGGGGATATGCCTCAGACCCAGGCTAGACCTCTGGACTCTGACTCCTTTAAATTACATTACATGAGGTTACATTCATTTATTAATAATTCATTTATGAATGTATTAAAACATAACAATCATCTTCCTGGTCGTACATCAGCAAACAACATTATACAATATTGACAATATATTCATAGACAGAATGTGTCATTGCACAAAGAGAAGTGCTGAcctttctttctcttcttcttggGCTTTTCATCCCAGGCGTTGGCACTGACAAGGGACACGTTGCCCTGGCCCAGGGAGGGCAGCAGTTTGGGCCGGGGGGCCACCGGGGGTTTGGGGACCTTCTTTGGAGG

Function

NR:

description
PREDICTED: PGC-1 and ERR-induced regulator in muscle protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1504395 True 693 lncRNA 0.51 2 64990791 65006415
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110511498 NA coding downstream 5542 64960178 ~ 64998613 (-)
LOC110517607 NA coding downstream 24981 64962542 ~ 64965810 (-)
LOC110513474 NA coding downstream 44625 64942418 ~ 64946166 (-)
LOC110517721 LOC106590767 coding downstream 281707 64706097 ~ 64709084 (-)
LOC110499867 LOC106576572 coding downstream 354289 64481916 ~ 64636502 (-)
LOC118938827 LOC106576471 coding upstream 14990 65021405 ~ 65058643 (-)
LOC110513258 cacna2d4 coding upstream 146968 65153383 ~ 65231663 (-)
LOC110517393 LOC106576623 coding upstream 262575 65268990 ~ 65303134 (-)
LOC110512490 LOC106592130 coding upstream 871595 65878010 ~ 65892365 (-)
LOC110511373 LOC106592131 coding upstream 886033 65892448 ~ 65898819 (-)
G1318451 NA non-coding downstream 21296 64953292 ~ 64969495 (-)
G1318457 LOC106576469 non-coding downstream 35703 64938188 ~ 64955088 (-)
G1318450 NA non-coding downstream 59842 64930543 ~ 64930949 (-)
G1318448 NA non-coding downstream 61198 64927343 ~ 64929593 (-)
G1318445 LOC106576468 non-coding downstream 69365 64919470 ~ 64921426 (-)
G1318488 NA non-coding upstream 77681 65084096 ~ 65084339 (-)
G1318491 NA non-coding upstream 83717 65090132 ~ 65091285 (-)
G1318498 NA non-coding upstream 93116 65099531 ~ 65103149 (-)
G1318499 NA non-coding upstream 94285 65100700 ~ 65102103 (-)
G1318515 NA non-coding upstream 127237 65133652 ~ 65134102 (-)
G1318164 LOC106576481 other downstream 763116 64216504 ~ 64227675 (-)
G1318092 NA other downstream 906903 64083037 ~ 64083888 (-)
G1316904 LOC106609576 other downstream 1702887 63256527 ~ 63287904 (-)
G1316451 NA other downstream 2086109 62902859 ~ 62904682 (-)
G1318477 NA other upstream 61862 65068277 ~ 65153287 (-)
G1318935 NA other upstream 463552 65469967 ~ 65473164 (-)
G1319357 LOC106593594 other upstream 1272630 66279045 ~ 66282108 (-)
LOC110490781 LOC106576552 other upstream 1802032 66808409 ~ 66920061 (-)
G1319781 LOC106576551 other upstream 1849764 66856179 ~ 66862281 (-)

Expression

G1318465(LOC106576470) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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G1318465(LOC106576470) Expression in each Bioproject

Bar chart with 11 bars.
G1318465(LOC106576470) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network