G1318491


Basic Information

Item Value
gene id G1318491
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 65090132 ~ 65091285 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1504452
tgtgtgtgtgtgttcctgtgaggCAGAGAACAGGACTGTGTGCTTCTCATCACCAGCTGAACATGGCTGCTACTGACAGGCTGGACACACAGAGAATCCTCTGTTGTTTATTTATATgtggtggagagaggaagagagagagagaatgatatagaatgatatagagaatgatagagagaatGATATAGAATGATAGCGAGAATGATATAGAATGatagagagaatgatagagagaatgatagagagaatgatagagagaatGATATAGAAAATGAAATAGAATGATATAGAGAATGATACAAAGAATGATATAGAATGATAGAGAGAATGATATAGAATGATAGAGAGAATAATAGTTCTGTACATGAGTTCAGTACAGCTCAGAGATGGCTTGATGCAGTATAGTGCAGTTATTTAGTGTACAGCTCAGAGATGGCTTGTTGCAGTATAGTGCAGTTATTTAGTGTACAGCTCAGAGATGGCTTGTTGCAGTGTGTCACATCGAGTGTGTCGTCCTCTAGTCTTTATGGCCCAGCTGGCCGGTTGGGGAGGGTCACAGCACGGGGAAATGGAAGTGTTCCTCTGGCTGGTGGTTTTGGTCGTGATCGACCTGAACCGCCTGCCAGAGGAGAGTTTTAGTAGAGTCCTGATGGTGGAGGGGCTTTTGTGAGTCAATCTGCTGTAGAACTGCTCTAGTTGATTGGGCAGTGGGGGGGGAGAAGTGGAGAAGTGTTGTTCTAGCCTGACTTCAATCTGCTGTTGGGCTGCATTCGTTCCCCAGGAGAAGATTATGCCGTTTCCTGCTATCTCTTTAATAACAGATTAAGATgtgttggagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1504452 True 840 lncRNA 0.43 3 65090132 65091285

Neighbor

gene id symbol gene type direction distance location
LOC118938827 LOC106576471 coding downstream 31489 65021405 ~ 65058643 (-)
LOC118938826 NA coding downstream 75721 64995972 ~ 65014411 (-)
LOC110510812 NA coding downstream 89153 64997957 ~ 65000979 (-)
LOC110511498 NA coding downstream 104883 64960178 ~ 64998613 (-)
LOC110513258 cacna2d4 coding upstream 62098 65153383 ~ 65231663 (-)
LOC110517393 LOC106576623 coding upstream 177705 65268990 ~ 65303134 (-)
LOC110512490 LOC106592130 coding upstream 786725 65878010 ~ 65892365 (-)
LOC110511373 LOC106592131 coding upstream 801163 65892448 ~ 65898819 (-)
LOC110511371 LOC106597280 coding upstream 810457 65901742 ~ 65979435 (-)
G1318488 NA non-coding downstream 5793 65084096 ~ 65084339 (-)
G1318458 NA non-coding downstream 76147 64939624 ~ 65013985 (-)
G1318465 LOC106576470 non-coding downstream 83717 64990791 ~ 65006415 (-)
G1318451 NA non-coding downstream 120637 64953292 ~ 64969495 (-)
G1318498 NA non-coding upstream 8246 65099531 ~ 65103149 (-)
G1318499 NA non-coding upstream 9415 65100700 ~ 65102103 (-)
G1318515 NA non-coding upstream 42367 65133652 ~ 65134102 (-)
G1318523 NA non-coding upstream 50148 65141433 ~ 65142731 (-)
G1318479 NA non-coding upstream 57136 65148421 ~ 65150086 (-)
LOC110499867 LOC106576572 other downstream 604814 64481916 ~ 64636502 (-)
G1318164 LOC106576481 other downstream 862457 64216504 ~ 64227675 (-)
G1318092 NA other downstream 1006244 64083037 ~ 64083888 (-)
G1316904 LOC106609576 other downstream 1802228 63256527 ~ 63287904 (-)
G1316451 NA other downstream 2185450 62902859 ~ 62904682 (-)
G1318935 NA other upstream 378682 65469967 ~ 65473164 (-)
G1319357 LOC106593594 other upstream 1187760 66279045 ~ 66282108 (-)
LOC110490781 LOC106576552 other upstream 1717162 66808409 ~ 66920061 (-)
G1319781 LOC106576551 other upstream 1764894 66856179 ~ 66862281 (-)
G1319847 NA other upstream 1869666 66960951 ~ 66961304 (-)

Expression


Co-expression Network