Gene
RNA
| Item | Value |
|---|---|
| gene id | G1318498 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 65099531 ~ 65103149 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1504466 | False | 365 | lncRNA | 0.46 | 2 | 65099531 | 65103149 |
| TU1504465 | True | 236 | lncRNA | 0.47 | 2 | 65100888 | 65103149 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938827 | LOC106576471 | coding | downstream | 40888 | 65021405 ~ 65058643 (-) |
| LOC118938826 | NA | coding | downstream | 85120 | 64995972 ~ 65014411 (-) |
| LOC110510812 | NA | coding | downstream | 98552 | 64997957 ~ 65000979 (-) |
| LOC110511498 | NA | coding | downstream | 114282 | 64960178 ~ 64998613 (-) |
| LOC110513258 | cacna2d4 | coding | upstream | 50234 | 65153383 ~ 65231663 (-) |
| LOC110517393 | LOC106576623 | coding | upstream | 165841 | 65268990 ~ 65303134 (-) |
| LOC110512490 | LOC106592130 | coding | upstream | 774861 | 65878010 ~ 65892365 (-) |
| LOC110511373 | LOC106592131 | coding | upstream | 789299 | 65892448 ~ 65898819 (-) |
| LOC110511371 | LOC106597280 | coding | upstream | 798593 | 65901742 ~ 65979435 (-) |
| G1318491 | NA | non-coding | downstream | 8246 | 65090132 ~ 65091285 (-) |
| G1318488 | NA | non-coding | downstream | 15192 | 65084096 ~ 65084339 (-) |
| G1318458 | NA | non-coding | downstream | 85546 | 64939624 ~ 65013985 (-) |
| G1318515 | NA | non-coding | upstream | 30503 | 65133652 ~ 65134102 (-) |
| G1318523 | NA | non-coding | upstream | 38284 | 65141433 ~ 65142731 (-) |
| G1318479 | NA | non-coding | upstream | 45272 | 65148421 ~ 65150086 (-) |
| G1318477 | NA | non-coding | upstream | 47369 | 65068277 ~ 65153287 (-) |
| G1318529 | NA | non-coding | upstream | 56862 | 65160011 ~ 65160642 (-) |
| LOC110499867 | LOC106576572 | other | downstream | 614213 | 64481916 ~ 64636502 (-) |
| G1318164 | LOC106576481 | other | downstream | 871856 | 64216504 ~ 64227675 (-) |
| G1318092 | NA | other | downstream | 1015643 | 64083037 ~ 64083888 (-) |
| G1316904 | LOC106609576 | other | downstream | 1811627 | 63256527 ~ 63287904 (-) |
| G1316451 | NA | other | downstream | 2194849 | 62902859 ~ 62904682 (-) |
| G1318935 | NA | other | upstream | 366818 | 65469967 ~ 65473164 (-) |
| G1319357 | LOC106593594 | other | upstream | 1175896 | 66279045 ~ 66282108 (-) |
| LOC110490781 | LOC106576552 | other | upstream | 1705298 | 66808409 ~ 66920061 (-) |
| G1319781 | LOC106576551 | other | upstream | 1753030 | 66856179 ~ 66862281 (-) |
| G1319847 | NA | other | upstream | 1857802 | 66960951 ~ 66961304 (-) |
