G1318523


Basic Information

Item Value
gene id G1318523
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 65141433 ~ 65142731 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1504499
TCCCTGACATTGCCATAGGCCTGTAAAATCTGTGTCTTAATCTACCCCACCAAACCAACTCCCAACTGGGGTAGAGTATACATAAATACACAGGTGGGTTCCCAAAGGACTGCTTAGCAGTCAGTAGTTAGTAGAGTGTAGAAGAGTAGACTTgagtacagtaaagtaaagaCCGTATCATTTACAGGAAGAAATTCTAAACATACAGGAGACCCATCCACCCTCTCACCCTCCGTCCTTCCCAAACCCTGACTCAAAACCAACCCTCCGTCCTTCCCAAACCCTGACCCAAAACCAACCCTCCGTCCTTTCCAAACCCTGACCCAAAACCAACCCTCCGTCCTTCCCAAACCCTGACCCAAAACCAACCCTCCGTCCTTTCCAAACCCTGACCCAAAACCAACCCTCCGTCCTTTCCAAACCCTGACCCAAAACCAACCCTCCGTCCTTCCCAAACCCTGACCCAAAACCAACCCTTCAGCCGCTCACCTCTGTACAGCAGCCACTCCATCCAGTGCTTGAAGTCCCTCAGGTTGCAGTCACACTCCCAGGGGTTAGCCCCTAGCTGAAGAGACTGGAGGTTAGCCAGGGGCTCGAAGGCTGCTCTCTCCAGGGCATGGAGCCTGTTCCCGGCCACGGAGAGCCACGTCAGCCCCTGCAGCTCATCCAGCAGACCCAGGGGGATATCAGACAGCCCGTTGAGGGAGACATCTAGCTTCCTCAGCCCCACCAGCCCCTGGAAGAGATCCCTATCCAAGGCCCTAAGACTGTTGTTGTGGAGGGTCAGATCTGATAGATTCCCCAGGTCCTTGAAGAGCGCTGGGGGAAGATTATCCAGGTAGTTGTTGGAGAGATCCAGTCGCTCCAGGGAGGTGAGGTTAGCGAAGGACCCTGGACCCAGGGAGGAGAGGTGGTTGTTGGGCAGCAGGAGGGTGCGGGCGGAGACGGGGAGATGGGTGAGGGCGGGCATGGAGAGCAGGCCGCGCCCGCTGCAGTCTACGTCGGTGGCGTTGCAGAAGCAGGTCGGAGGACAGGCGGTGGTTAGATCCACCAGGgaagacaggacacacaggagaCACAGCAGAActggagacagacggagagagaaagggtcAGAGGTCAATAAGGCAGAAACCAATCTCCCTGTGAAATCATTGTACATTGCAGAGcgcaactgaagagagagagggacagggacaaagatacagggtcagagagagagaccca

Function

NR:

description
leucine-rich repeat and transmembrane domain-containing protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1504499 True 1227 lncRNA 0.55 2 65141433 65142731

Neighbor

gene id symbol gene type direction distance location
LOC118938827 LOC106576471 coding downstream 82790 65021405 ~ 65058643 (-)
LOC118938826 NA coding downstream 127022 64995972 ~ 65014411 (-)
LOC110510812 NA coding downstream 140454 64997957 ~ 65000979 (-)
LOC110511498 NA coding downstream 156184 64960178 ~ 64998613 (-)
LOC110513258 cacna2d4 coding upstream 10652 65153383 ~ 65231663 (-)
LOC110517393 LOC106576623 coding upstream 126259 65268990 ~ 65303134 (-)
LOC110512490 LOC106592130 coding upstream 735279 65878010 ~ 65892365 (-)
LOC110511373 LOC106592131 coding upstream 749717 65892448 ~ 65898819 (-)
LOC110511371 LOC106597280 coding upstream 759011 65901742 ~ 65979435 (-)
G1318515 NA non-coding downstream 7331 65133652 ~ 65134102 (-)
G1318498 NA non-coding downstream 38284 65099531 ~ 65103149 (-)
G1318499 NA non-coding downstream 39330 65100700 ~ 65102103 (-)
G1318491 NA non-coding downstream 50148 65090132 ~ 65091285 (-)
G1318488 NA non-coding downstream 57094 65084096 ~ 65084339 (-)
G1318479 NA non-coding upstream 5690 65148421 ~ 65150086 (-)
G1318477 NA non-coding upstream 7787 65068277 ~ 65153287 (-)
G1318529 NA non-coding upstream 17280 65160011 ~ 65160642 (-)
G1318548 NA non-coding upstream 77710 65220441 ~ 65220863 (-)
G1318555 NA non-coding upstream 87258 65229989 ~ 65233914 (-)
LOC110499867 LOC106576572 other downstream 656115 64481916 ~ 64636502 (-)
G1318164 LOC106576481 other downstream 913758 64216504 ~ 64227675 (-)
G1318092 NA other downstream 1057545 64083037 ~ 64083888 (-)
G1316904 LOC106609576 other downstream 1853529 63256527 ~ 63287904 (-)
G1316451 NA other downstream 2236751 62902859 ~ 62904682 (-)
G1318935 NA other upstream 327236 65469967 ~ 65473164 (-)
G1319357 LOC106593594 other upstream 1136314 66279045 ~ 66282108 (-)
LOC110490781 LOC106576552 other upstream 1665716 66808409 ~ 66920061 (-)
G1319781 LOC106576551 other upstream 1713448 66856179 ~ 66862281 (-)
G1319847 NA other upstream 1818220 66960951 ~ 66961304 (-)

Expression


Co-expression Network