Gene
RNA
| Item | Value |
|---|---|
| gene id | G1318925 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 65433938 ~ 65434153 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1505018 | True | 216 | lncRNA | 0.38 | 1 | 65433938 | 65434153 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517393 | LOC106576623 | coding | downstream | 130804 | 65268990 ~ 65303134 (-) |
| LOC110513258 | cacna2d4 | coding | downstream | 202275 | 65153383 ~ 65231663 (-) |
| LOC118938827 | LOC106576471 | coding | downstream | 375295 | 65021405 ~ 65058643 (-) |
| LOC118938826 | NA | coding | downstream | 419527 | 64995972 ~ 65014411 (-) |
| LOC110510812 | NA | coding | downstream | 432959 | 64997957 ~ 65000979 (-) |
| LOC110512490 | LOC106592130 | coding | upstream | 443857 | 65878010 ~ 65892365 (-) |
| LOC110511373 | LOC106592131 | coding | upstream | 458295 | 65892448 ~ 65898819 (-) |
| LOC110511371 | LOC106597280 | coding | upstream | 467589 | 65901742 ~ 65979435 (-) |
| LOC110499707 | LOC106609801 | coding | upstream | 547488 | 65981641 ~ 65986435 (-) |
| LOC110500955 | cpsf6 | coding | upstream | 553779 | 65987246 ~ 66009466 (-) |
| G1318867 | NA | non-coding | downstream | 156008 | 65277356 ~ 65277930 (-) |
| G1318561 | NA | non-coding | downstream | 178074 | 65255487 ~ 65255864 (-) |
| G1318555 | NA | non-coding | downstream | 200024 | 65229989 ~ 65233914 (-) |
| G1318548 | NA | non-coding | downstream | 213075 | 65220441 ~ 65220863 (-) |
| G1318529 | NA | non-coding | downstream | 273296 | 65160011 ~ 65160642 (-) |
| G1318926 | NA | non-coding | upstream | 5935 | 65440088 ~ 65440350 (-) |
| G1318934 | NA | non-coding | upstream | 34231 | 65468384 ~ 65468714 (-) |
| G1318941 | NA | non-coding | upstream | 55885 | 65490038 ~ 65491611 (-) |
| G1318958 | NA | non-coding | upstream | 81660 | 65515813 ~ 65517510 (-) |
| G1318961 | NA | non-coding | upstream | 90694 | 65524847 ~ 65525349 (-) |
| G1318477 | NA | other | downstream | 282538 | 65068277 ~ 65153287 (-) |
| LOC110499867 | LOC106576572 | other | downstream | 948620 | 64481916 ~ 64636502 (-) |
| G1318164 | LOC106576481 | other | downstream | 1206263 | 64216504 ~ 64227675 (-) |
| G1318092 | NA | other | downstream | 1350050 | 64083037 ~ 64083888 (-) |
| G1316904 | LOC106609576 | other | downstream | 2146034 | 63256527 ~ 63287904 (-) |
| G1318935 | NA | other | upstream | 35814 | 65469967 ~ 65473164 (-) |
| G1319357 | LOC106593594 | other | upstream | 844892 | 66279045 ~ 66282108 (-) |
| LOC110490781 | LOC106576552 | other | upstream | 1374294 | 66808409 ~ 66920061 (-) |
| G1319781 | LOC106576551 | other | upstream | 1422026 | 66856179 ~ 66862281 (-) |
| G1319847 | NA | other | upstream | 1526798 | 66960951 ~ 66961304 (-) |
