G1318935


Basic Information

Item Value
gene id G1318935
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 65469967 ~ 65473164 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1505028
gagaagaggaggggagagaagagaagggagggaagagaagagaggggagagaacagaggggagagaagagaagagaagggagggaagaggagagaagagagagaagtggaggggagagaagagaagggagggaagagaagagaggggagagaagagaagagaagggagggaagaggagagaagagagagaagaggagggaagagagagaagaggagggaagagagagaagaggagggaagagagagaagaggagggaagagagagaagaggagggaagtgaagagaagaagagggaaaggggagaagaggagggagagaagagagagaagaggagggaagagaagagaagaggagggaagagaagagaagaggagggaagagaagagaagaggagggaagagaagagaagaggatggaagcgagagaagaggagggagagaagagaagaggagggaaaagagagaaaggagggagagaagagaagaggggggaagggtgagaagaggagggacgggaagaggagggaagggagagaagaggagggaagggagagaagaggagggagagtagaggagggagagtagaggagggagagaagagacgaggaggaaagggagagaagaggagggagataagagaagaggagggaaaggagagaagaggagtgaagGGAgataagagaagaggagagagagaagaggagggagagaagagaagaggaggaaaggaaagggagagaagaggagggagagaagagaagaggagggagagaagaggagggagagaagagaaggggagggagagaagagaagaggagggagagaagagaagaggaggaaaggaaagggagagaagagagagaagaggagggaagagaagaggagggaagagaagagaagaggagggaagagaagagaagaggatggaagcgagagaagaggagggagagaagagaagaggagggaaaagagagaatggagggagagaagagaagaggggggaagggtgagaagaggagggacgggaagaggagggaagggagagaagaggagggaagggagagaagaggagggagagtagaggagggagagaagagacgaggaggaaagggagagaagaggagggagataagagaagaggagggaaaggagagaagaggagtgaagggagagaagagaagaggagagagagtagaggagggagagaagagaagaggaggaaaggaaaggaaagggagagaagaggagggagagaagagaagaggagggagagaagaggagggagagaagagaaggggagggagagaagagaagaggagggagagaagagaagaggaggaaaggaaagggagagaagaggagggagagaagagaaggggagggaaaATAATAGAAGGGGCCTCCTGAGATGTGTTTATTGAGATTGTCATGTCAGATCCCTTTCTTGGTCAGTTGTGGTGCCGCTGCTTCTCACATCTCACATCACTGGCCAcatcagagatggagagagacagtcagaatgAGACAATAATAGATGGAAGGGAAaatagagtgacagagagagagagagagagagagagagagagagacagagagacagagacagagagagacagagacagagagagagagagagagggaaacagagagagagagacagagagagggagacagagatagagagaacaggaggagggtgaagaggtggagatagaggtggagatagagagagagaacaggaggagggtgaagaggtggagatagaggtggagatagaggtggagatagagagggagatagaggtggagatagagggggagatagagggggagatagaggtggagatagagggggagatagaggtggagatagaggtggagatagaggtggagatagaggtggagatagaggtggagataGAGGGGTGAGGAAAATGCACTGTAATGAATGCTGTGCCACAGTTCCCATATTTAAGAGACTGCATCATTGTGTTTTATGGGGCTCTCAgggtagtggggagggaggaagacgaagaaagagggaagagggtATACATCGGTCTGAGAGAAGAAATGCTACAACCCCTGAGCCACACAGCCTCTGAGGAACAGACTGTACAGACAGGAGAAAGGCAATACGTTTTAGAAGGATACAGTGTGGTTCTCCTCAGAAATAACCTTGTGTTAGGATGAGACGttgagtccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacagacacacacagacatacacacacacacacacacacacacacacacacacacacacacagacacacatacacagacacacacacagacatacacacacacacagacacacacacacagacacacacagacacacacacacacacagacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacagccatatgaGCCTGTATTTTGTTAATGGAACATACAGAGATGCCTGACATTCCAAACAGACCTATAAATAGTGGCGCCTAGCAACGGGCAGAAAGCAGAGCACATCGCTCCTCTCCTCTACGCCGCCAACCTGCTTCACATACACACGCAGGAGGGGTGCCTGGGTAACCTGAAGTGAAAAGGCCTGGTCCCattcacacacacccctctgaTCTAAACCCGATATAAAGCAGAgatagactggtcccagatcagtttgtgttttATTACCAAACCCTACGGTCGTTGTCATTccaactagcctggtcccagatcagtttgtgttgtatCACCAAACCCTACGGTCGTTGTCATTccaactagcctggtcccagatcagtttgtgttgtatCACCAAACCCTACGGTCGTTGTCATGCCAACTAGTGACCAGAGAGGATTTGACCAAGCAAAGAAATCTGTgaacctggcgaccgtgtcacagGCATCACATCTGggaacctggcgaccgtgtcacagGCATCACATCTGGGAACCTGGAGACCGTGTCACAGGCATCACATCTGggaacctggcgaccgtgtcacagGCATCACATCTGggaacctggcgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1505028 True 3102 TUCP 0.51 2 65469967 65473164

Neighbor

gene id symbol gene type direction distance location
LOC110517393 LOC106576623 coding downstream 166833 65268990 ~ 65303134 (-)
LOC110513258 cacna2d4 coding downstream 238304 65153383 ~ 65231663 (-)
LOC118938827 LOC106576471 coding downstream 411324 65021405 ~ 65058643 (-)
LOC118938826 NA coding downstream 455556 64995972 ~ 65014411 (-)
LOC110510812 NA coding downstream 468988 64997957 ~ 65000979 (-)
LOC110512490 LOC106592130 coding upstream 404846 65878010 ~ 65892365 (-)
LOC110511373 LOC106592131 coding upstream 419284 65892448 ~ 65898819 (-)
LOC110511371 LOC106597280 coding upstream 428578 65901742 ~ 65979435 (-)
LOC110499707 LOC106609801 coding upstream 508477 65981641 ~ 65986435 (-)
LOC110500955 cpsf6 coding upstream 514768 65987246 ~ 66009466 (-)
G1318934 NA non-coding downstream 1253 65468384 ~ 65468714 (-)
G1318926 NA non-coding downstream 29617 65440088 ~ 65440350 (-)
G1318925 NA non-coding downstream 35814 65433938 ~ 65434153 (-)
G1318867 NA non-coding downstream 192037 65277356 ~ 65277930 (-)
G1318561 NA non-coding downstream 214103 65255487 ~ 65255864 (-)
G1318941 NA non-coding upstream 16874 65490038 ~ 65491611 (-)
G1318958 NA non-coding upstream 42649 65515813 ~ 65517510 (-)
G1318961 NA non-coding upstream 51683 65524847 ~ 65525349 (-)
G1318964 NA non-coding upstream 54332 65527496 ~ 65530244 (-)
G1318975 NA non-coding upstream 74406 65547570 ~ 65548358 (-)
G1318477 NA other downstream 318567 65068277 ~ 65153287 (-)
LOC110499867 LOC106576572 other downstream 984649 64481916 ~ 64636502 (-)
G1318164 LOC106576481 other downstream 1242292 64216504 ~ 64227675 (-)
G1318092 NA other downstream 1386079 64083037 ~ 64083888 (-)
G1316904 LOC106609576 other downstream 2182063 63256527 ~ 63287904 (-)
G1319357 LOC106593594 other upstream 805881 66279045 ~ 66282108 (-)
LOC110490781 LOC106576552 other upstream 1335283 66808409 ~ 66920061 (-)
G1319781 LOC106576551 other upstream 1383015 66856179 ~ 66862281 (-)
G1319847 NA other upstream 1487787 66960951 ~ 66961304 (-)
LOC110511902 LOC106609654 other upstream 1607617 67079306 ~ 67084695 (-)

Expression


Co-expression Network