G1318941


Basic Information

Item Value
gene id G1318941
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 65490038 ~ 65491611 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1505034
gtgcgtgcgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgtgtgtgtgttaccttttgAACTGGGGTTGACTACTGATCTGGAGCCAGACTGGGAGAGGCAGTGGGTGGTAGTCTGGCTAACACCGacttcagacaaacacacacccctTTGTGGCATTGACATCGGCCCACAACTGTTGCCGTTAGTCTTTAGCACCTTCCTTCCTATGCCTCTAGCTGATAATGTCtccttaacctctaggctacagCGCCAGCAGAATATCAGATCATACACTACAGACCTTTATAAAGGCACCCTGTTAGAGGACTCAGGTATGAAGGCACCATGTTAGAGGACTCAGGTATGAAGGAACCCTGTTGGAGGACTCAGGTATGAAGGAACCCTGTTGGAGGACTCAGGTATGAAGGAACCCTGTTAGAGGACTCAGGTATGAAGGAACCCTGTTAGAGGACTCAGGTATGAAGGAACCCTGTTTAAGGACTCAGGTATGAAGGAACCCTGTTGGAGGACTCAGGTATGAAGGAACCCTGTTTGAGGACTCAGGTATGAAGGAACCCTGTTTAAGGACTCGGGTATGAAGGAACCCTGTTGGAGGACTCAGGTATGAAGGAACCCTGTTGGAGGACTCAGGTATGAAGGAACCCTGTTTGAGGACTCAGGTATGAAGGAACCCTGTTGGAGGACTCAGGTATGAAGGAACCCTGTTTGAGGACTCAGGTATAAAGGAACCCTGTTGGAGGACTCAGGTATGAAGGAACCCTGTTGGAGGACTCAGGTATGAAGGAACCCTGTTGGAGGACTCAGGTGTGAAGGAACCCTGTTGGAGGACACAGCAACAAATGACTGCCTCATGGTAGCTAAGTGTTTCTTGTTTCAGCAGCGGCCTTAGAACTAGAGCATTCCTACCAACACAGAGCGTACCTACCAACACAGAGCGTACCTACCAACACAGAGCGTTCCTACCAACACAGAGCGTACCTACCAACACAGAGCGTTCCTAACAACACAGAGCGTACCTACCAACACAGAGCGTACCTACCAACACAGAGCGTACCTACCAACACAGAGCGCTCCTAACAACACAGAGCGTACCTACCAACACAGAGCGTTCCTACCAACACAGAGCGTACCTACCAACACAGAGCGCTCCTAACAACACAGAGCGTACCTACC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1505034 True 1226 lncRNA 0.51 2 65490038 65491611

Neighbor

gene id symbol gene type direction distance location
LOC110517393 LOC106576623 coding downstream 186904 65268990 ~ 65303134 (-)
LOC110513258 cacna2d4 coding downstream 258375 65153383 ~ 65231663 (-)
LOC118938827 LOC106576471 coding downstream 431395 65021405 ~ 65058643 (-)
LOC118938826 NA coding downstream 475627 64995972 ~ 65014411 (-)
LOC110512490 LOC106592130 coding upstream 386399 65878010 ~ 65892365 (-)
LOC110511373 LOC106592131 coding upstream 400837 65892448 ~ 65898819 (-)
LOC110511371 LOC106597280 coding upstream 410131 65901742 ~ 65979435 (-)
LOC110499707 LOC106609801 coding upstream 490030 65981641 ~ 65986435 (-)
LOC110500955 cpsf6 coding upstream 496321 65987246 ~ 66009466 (-)
G1318934 NA non-coding downstream 21324 65468384 ~ 65468714 (-)
G1318926 NA non-coding downstream 49688 65440088 ~ 65440350 (-)
G1318925 NA non-coding downstream 55885 65433938 ~ 65434153 (-)
G1318867 NA non-coding downstream 212108 65277356 ~ 65277930 (-)
G1318561 NA non-coding downstream 234174 65255487 ~ 65255864 (-)
G1318958 NA non-coding upstream 24202 65515813 ~ 65517510 (-)
G1318961 NA non-coding upstream 33236 65524847 ~ 65525349 (-)
G1318964 NA non-coding upstream 35885 65527496 ~ 65530244 (-)
G1318975 NA non-coding upstream 55959 65547570 ~ 65548358 (-)
G1318976 NA non-coding upstream 59668 65551279 ~ 65552443 (-)
G1318935 NA other downstream 16874 65469967 ~ 65473164 (-)
G1318477 NA other downstream 338638 65068277 ~ 65153287 (-)
LOC110499867 LOC106576572 other downstream 1004720 64481916 ~ 64636502 (-)
G1318164 LOC106576481 other downstream 1262363 64216504 ~ 64227675 (-)
G1318092 NA other downstream 1406150 64083037 ~ 64083888 (-)
G1319357 LOC106593594 other upstream 787434 66279045 ~ 66282108 (-)
LOC110490781 LOC106576552 other upstream 1316836 66808409 ~ 66920061 (-)
G1319781 LOC106576551 other upstream 1364568 66856179 ~ 66862281 (-)
G1319847 NA other upstream 1469340 66960951 ~ 66961304 (-)
LOC110511902 LOC106609654 other upstream 1589170 67079306 ~ 67084695 (-)

Expression


Co-expression Network